Difference between revisions of "KDO-8P"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14187 RXN-14187] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * ec number: ** [http:/...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=KDO-8P KDO-8P] == * smiles: ** C(OP([O-])(=O)[O-])C(O)[CH]1(OC(O)(C([O-])=O)CC(C1O)O) * common...")
 
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14187 RXN-14187] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=KDO-8P KDO-8P] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C(OP([O-])(=O)[O-])C(O)[CH]1(OC(O)(C([O-])=O)CC(C1O)O)
 
* common name:
 
* common name:
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** ORF
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** 3-deoxy-D-manno-octulosonate 8-phosphate
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* ec number:
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* inchi key:
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** [http://enzyme.expasy.org/EC/3.6.1.6 EC-3.6.1.6]
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** InChIKey=IZZNRKJLBIYBJN-HXUQBWEZSA-K
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* molecular weight:
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** 315.15   
 
* Synonym(s):
 
* Synonym(s):
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** 3-deoxy-D-manno-octulosonate 8-P
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** 2-dehydro-3-deoxy-D-octonate 8-P
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** 2-dehydro-3-deoxy-D-octonate 8-phosphate
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** Kdo-8P
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[DCDP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[DCMP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
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* [[KDO-8PSYNTH-RXN]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 dCDP[c] '''+''' 1 H2O[c] '''=>''' 1 dCMP[c] '''+''' 1 H+[c] '''+''' 1 phosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_20236]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_12899]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-7210]], pyrimidine deoxyribonucleotides biosynthesis from CTP: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7210 PWY-7210]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* PUBCHEM:
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{{#set: common name=ORF}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=91825728 91825728]
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{{#set: ec number=EC-3.6.1.6}}
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* CHEBI:
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{{#set: gene associated=Tiso_gene_20236|Tiso_gene_12899}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=85985 85985]
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{{#set: in pathway=PWY-7210}}
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* BIGG : kdo8p
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{{#set: reconstruction category=orthology}}
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* LIGAND-CPD:
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{{#set: reconstruction tool=pantograph}}
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** [http://www.genome.jp/dbget-bin/www_bget?C04478 C04478]
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{{#set: reconstruction source=esiliculosus}}
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{{#set: smiles=C(OP([O-])(=O)[O-])C(O)[CH]1(OC(O)(C([O-])=O)CC(C1O)O)}}
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{{#set: reconstruction category=annotation}}
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{{#set: common name=3-deoxy-D-manno-octulosonate 8-phosphate}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: inchi key=InChIKey=IZZNRKJLBIYBJN-HXUQBWEZSA-K}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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{{#set: molecular weight=315.15    }}
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{{#set: common name=3-deoxy-D-manno-octulosonate 8-P|2-dehydro-3-deoxy-D-octonate 8-P|2-dehydro-3-deoxy-D-octonate 8-phosphate|Kdo-8P}}
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{{#set: produced by=KDO-8PSYNTH-RXN}}

Latest revision as of 20:20, 21 March 2018

Metabolite KDO-8P

  • smiles:
    • C(OP([O-])(=O)[O-])C(O)[CH]1(OC(O)(C([O-])=O)CC(C1O)O)
  • common name:
    • 3-deoxy-D-manno-octulosonate 8-phosphate
  • inchi key:
    • InChIKey=IZZNRKJLBIYBJN-HXUQBWEZSA-K
  • molecular weight:
    • 315.15
  • Synonym(s):
    • 3-deoxy-D-manno-octulosonate 8-P
    • 2-dehydro-3-deoxy-D-octonate 8-P
    • 2-dehydro-3-deoxy-D-octonate 8-phosphate
    • Kdo-8P

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"C(OP([O-])(=O)[O-])C(O)[CH]1(OC(O)(C([O-])=O)CC(C1O)O)" cannot be used as a page name in this wiki.



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