Difference between revisions of "Tiso gene 17170"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8988 RXN-8988] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/6....")
(Created page with "Category:Gene == Gene Tiso_gene_17170 == * right end position: ** 3627 * transcription direction: ** NEGATIVE * left end position: ** 2287 * centisome position: ** 59.1108...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8988 RXN-8988] ==
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== Gene Tiso_gene_17170 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 3627
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/6.2.1.4 EC-6.2.1.4]
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** NEGATIVE
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* left end position:
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** 2287
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* centisome position:
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** 59.110878   
 
* Synonym(s):
 
* Synonym(s):
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** FNR
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[1.18.1.2-RXN]]
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** 1 [[CO-A]][c] '''+''' 1 [[GTP]][c] '''+''' 1 [[ITACONATE]][c] '''=>''' 1 [[CPD-1137]][c] '''+''' 1 [[GDP]][c] '''+''' 1 [[Pi]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 coenzyme A[c] '''+''' 1 GTP[c] '''+''' 1 itaconate[c] '''=>''' 1 itaconyl-CoA[c] '''+''' 1 GDP[c] '''+''' 1 phosphate[c]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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== Genes associated with this reaction  ==
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* Reaction: [[RXN-17897]]
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[annotation-in-silico_annotation]]
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* Gene: [[Tiso_gene_11866]]
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*** Assignment: ec-number
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** Source: [[orthology-esiliculosus]]
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** Source: [[annotation-experimental_annotation]]
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== Pathways  ==
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*** Assignment: ec-number
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* [[PWY-5749]], itaconate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5749 PWY-5749]
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== Pathways associated ==
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-7230]]
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== Reconstruction information  ==
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* [[PWY-101]]
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: right end position=3627}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02405 R02405]
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{{#set: transcription direction=NEGATIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=2287}}
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{{#set: ec number=EC-6.2.1.4}}
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{{#set: centisome position=59.110878    }}
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{{#set: gene associated=Tiso_gene_11866}}
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{{#set: common name=FNR}}
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{{#set: in pathway=PWY-5749}}
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{{#set: reaction associated=1.18.1.2-RXN|RXN-17897}}
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{{#set: reconstruction category=orthology}}
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{{#set: pathway associated=PWY-7230|PWY-101}}
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{{#set: reconstruction source=orthology-esiliculosus}}
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−
{{#set: reconstruction tool=pantograph}}
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Latest revision as of 20:20, 21 March 2018

Gene Tiso_gene_17170

  • right end position:
    • 3627
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 2287
  • centisome position:
    • 59.110878
  • Synonym(s):
    • FNR

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_17170&oldid=47935"