Difference between revisions of "Tiso gene 5996"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDROOROTATE-DEHYDROGENASE-RXN DIHYDROOROTATE-DEHYDROGENASE-RXN] == * direction: ** LEFT-TO-RIGHT...")
(Created page with "Category:Gene == Gene Tiso_gene_5996 == * right end position: ** 11427 * transcription direction: ** POSITIVE * left end position: ** 9055 * centisome position: ** 55.6033...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDROOROTATE-DEHYDROGENASE-RXN DIHYDROOROTATE-DEHYDROGENASE-RXN] ==
+
== Gene Tiso_gene_5996 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 11427
−
* common name:
+
* transcription direction:
−
** ORF
+
** POSITIVE
−
* ec number:
+
* left end position:
−
** [http://enzyme.expasy.org/EC/1.3.5.2 EC-1.3.5.2]
+
** 9055
 +
* centisome position:
 +
** 55.603313   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[4-NITROPHENYLPHOSPHATASE-RXN]]
−
** 1 [[ETR-Quinones]][c] '''+''' 1 [[DI-H-OROTATE]][c] '''=>''' 1 [[ETR-Quinols]][c] '''+''' 1 [[OROTATE]][c]
+
** Source: [[annotation-in-silico_annotation]]
−
* With common name(s):
+
*** Assignment: ec-number
−
** 1 an electron-transfer quinone[c] '''+''' 1 (S)-dihydroorotate[c] '''=>''' 1 an electron-transfer quinol[c] '''+''' 1 orotate[c]
+
* Reaction: [[ACID-PHOSPHATASE-RXN]]
−
 
+
** Source: [[annotation-in-silico_annotation]]
−
== Genes associated with this reaction  ==
+
*** Assignment: ec-number
−
Genes have been associated with this reaction based on different elements listed below.
+
* Reaction: [[RXN-5822]]
−
* [[Tiso_gene_4735]]
+
** Source: [[annotation-in-silico_annotation]]
−
** IN-SILICO_ANNOTATION
+
*** Assignment: ec-number
−
***EC-NUMBER
+
== Pathways associated ==
−
* [[Tiso_gene_5280]]
+
* [[PWY-6348]]
−
** [[pantograph]]-[[esiliculosus]]
+
* [[PWY-5083]]
−
== Pathways  ==
+
* [[NADPHOS-DEPHOS-PWY]]
−
* [[PWY-5686]], UMP biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5686 PWY-5686]
+
* [[NAD-BIOSYNTHESIS-II]]
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[esiliculosus]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: right end position=11427}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18073 18073]
+
{{#set: transcription direction=POSITIVE}}
−
* LIGAND-RXN:
+
{{#set: left end position=9055}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01868 R01868]
+
{{#set: centisome position=55.603313    }}
−
* UNIPROT:
+
{{#set: reaction associated=4-NITROPHENYLPHOSPHATASE-RXN|ACID-PHOSPHATASE-RXN|RXN-5822}}
−
** [http://www.uniprot.org/uniprot/O76140 O76140]
+
{{#set: pathway associated=PWY-6348|PWY-5083|NADPHOS-DEPHOS-PWY|NAD-BIOSYNTHESIS-II}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=ORF}}
+
−
{{#set: ec number=EC-1.3.5.2}}
+
−
{{#set: gene associated=Tiso_gene_4735|Tiso_gene_5280}}
+
−
{{#set: in pathway=PWY-5686}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Latest revision as of 21:20, 21 March 2018

Gene Tiso_gene_5996

  • right end position:
    • 11427
  • transcription direction:
    • POSITIVE
  • left end position:
    • 9055
  • centisome position:
    • 55.603313
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_5996&oldid=47956"