Difference between revisions of "RXN-11357"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_7322 == * left end position: ** 7319 * transcription direction: ** POSITIVE * right end position: ** 9289 * centisome position: ** 64.82154...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11357 RXN-11357] == * direction: ** LEFT-TO-RIGHT * common name: ** 9,9′-dicis-ζ-car...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_7322 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11357 RXN-11357] ==
−
* left end position:
+
* direction:
−
** 7319
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** POSITIVE
+
** 9,9′-dicis-ζ-carotene desaturase
−
* right end position:
+
−
** 9289
+
−
* centisome position:
+
−
** 64.82154   
+
 
* Synonym(s):
 
* Synonym(s):
 +
** ζ-carotene desaturase
 +
** ZDS
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[ALDEHYDE-DEHYDROGENASE-NADORNOP+-RXN]]
+
* With identifiers:
−
** in-silico_annotation
+
** 1 [[CPD-7524]][c] '''+''' 1 [[ETR-Quinones]][c] '''=>''' 1 [[ETR-Quinols]][c] '''+''' 1 [[CPD-7496]][c]
−
***ec-number
+
* With common name(s):
−
** [[pantograph]]-[[esiliculosus]]
+
** 1 7,9,9'-cis-neurosporene[c] '''+''' 1 an electron-transfer quinone[c] '''=>''' 1 an electron-transfer quinol[c] '''+''' 1 prolycopene[c]
−
* [[ALDEHYDE-DEHYDROGENASE-NADP+-RXN]]
+
 
−
** [[pantograph]]-[[esiliculosus]]
+
== Genes associated with this reaction  ==
−
* [[ALDHDEHYDROG-RXN]]
+
Genes have been associated with this reaction based on different elements listed below.
−
** [[pantograph]]-[[athaliana]]
+
* Gene: [[Tiso_gene_7142]]
−
* [[GLYCERALDEHYDE-DEHYDRO-RXN]]
+
** Source: [[orthology-esiliculosus]]
−
** [[pantograph]]-[[esiliculosus]]
+
== Pathways ==
−
* [[GLYCOLALD-DEHYDROG-RXN]]
+
* [[PWY-6475]], trans-lycopene biosynthesis II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6475 PWY-6475]
−
** [[pantograph]]-[[synechocystis]]
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
* [[R01752]]
+
== Reconstruction information  ==
−
** [[pantograph]]-[[synechocystis]]
+
* Category: [[orthology]]
−
* [[RXN-10089]]
+
** Source: [[orthology-esiliculosus]]
−
** [[pantograph]]-[[athaliana]]
+
*** Tool: [[pantograph]]
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[RXN-10715]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[RXN-10780]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[RXN-12332]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[RXN-14209]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[RXN-14224]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[RXN-14225]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[RXN-14280]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[RXN-37]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[RXN-5581]]
+
−
** in-silico_annotation
+
−
***ec-number
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[RXN-6002]]
+
−
** in-silico_annotation
+
−
***ec-number
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[RXN-6382]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
* [[RXN-9844]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[RXN66-3]]
+
−
** [[pantograph]]-[[synechocystis]]
+
−
== Pathways associated ==
+
−
* [[PWY-6061]]
+
−
* [[PWY-3641]]
+
−
* [[PWY66-161]]
+
−
* [[PWY66-21]]
+
−
* [[NPGLUCAT-PWY]]
+
−
* [[PWY-3981]]
+
−
* [[PWY66-162]]
+
−
* [[PWY-7269]]
+
−
* [[PWY-0]]
+
−
* [[PWY-7387]]
+
−
* [[PWY0-1280]]
+
−
* [[PWY-5760]]
+
−
* [[PWY-6181]]
+
−
* [[PWY-6307]]
+
−
* [[PWY-6313]]
+
−
* [[PWY-3162]]
+
−
* [[DARABCATK12-PWY]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=7319}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: transcription direction=POSITIVE}}
+
{{#set: common name=9,9′-dicis-ζ-carotene desaturase}}
−
{{#set: right end position=9289}}
+
{{#set: common name=ζ-carotene desaturase|ZDS}}
−
{{#set: centisome position=64.82154    }}
+
{{#set: gene associated=Tiso_gene_7142}}
−
{{#set: reaction associated=ALDEHYDE-DEHYDROGENASE-NADORNOP+-RXN|ALDEHYDE-DEHYDROGENASE-NADP+-RXN|ALDHDEHYDROG-RXN|GLYCERALDEHYDE-DEHYDRO-RXN|GLYCOLALD-DEHYDROG-RXN|R01752|RXN-10089|RXN-10715|RXN-10780|RXN-12332|RXN-14209|RXN-14224|RXN-14225|RXN-14280|RXN-37|RXN-5581|RXN-6002|RXN-6382|RXN-9844|RXN66-3}}
+
{{#set: in pathway=PWY-6475}}
−
{{#set: pathway associated=PWY-6061|PWY-3641|PWY66-161|PWY66-21|NPGLUCAT-PWY|PWY-3981|PWY66-162|PWY-7269|PWY-0|PWY-7387|PWY0-1280|PWY-5760|PWY-6181|PWY-6307|PWY-6313|PWY-3162|DARABCATK12-PWY}}
+
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 20:20, 21 March 2018

Reaction RXN-11357

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 9,9′-dicis-ζ-carotene desaturase
  • Synonym(s):
    • ζ-carotene desaturase
    • ZDS

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 7,9,9'-cis-neurosporene[c] + 1 an electron-transfer quinone[c] => 1 an electron-transfer quinol[c] + 1 prolycopene[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6475, trans-lycopene biosynthesis II (plants): PWY-6475
    • 8 reactions found over 8 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-11357&oldid=47976"