Difference between revisions of "DIHYDROOROTATE-DEHYDROGENASE-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_10996 == * right end position: ** 6707 * transcription direction: ** POSITIVE * left end position: ** 4886 * centisome position: ** 60.0688...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDROOROTATE-DEHYDROGENASE-RXN DIHYDROOROTATE-DEHYDROGENASE-RXN] == * direction: ** LEFT-TO-RIGHT...")
 
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_10996 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDROOROTATE-DEHYDROGENASE-RXN DIHYDROOROTATE-DEHYDROGENASE-RXN] ==
−
* right end position:
+
* direction:
−
** 6707
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** POSITIVE
+
** ORF
−
* left end position:
+
* ec number:
−
** 4886
+
** [http://enzyme.expasy.org/EC/1.3.5.2 EC-1.3.5.2]
−
* centisome position:
+
−
** 60.068848   
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* Reaction: [[3.5.5.1-RXN]]
+
* With identifiers:
 +
** 1 [[DI-H-OROTATE]][c] '''+''' 1 [[ETR-Quinones]][c] '''=>''' 1 [[OROTATE]][c] '''+''' 1 [[ETR-Quinols]][c]
 +
* With common name(s):
 +
** 1 (S)-dihydroorotate[c] '''+''' 1 an electron-transfer quinone[c] '''=>''' 1 orotate[c] '''+''' 1 an electron-transfer quinol[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_4735]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Assignment: automated-name-match
+
*** Assignment: EC-NUMBER
−
* Reaction: [[RXN-1404]]
+
* Gene: [[Tiso_gene_5280]]
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: automated-name-match
+
−
** Source: [[orthology-athaliana]]
+
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
−
* Reaction: [[RXN-17607]]
+
== Pathways  ==
−
** Source: [[annotation-in-silico_annotation]]
+
* [[PWY-5686]], UMP biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5686 PWY-5686]
−
*** Assignment: automated-name-match
+
** '''6''' reactions found over '''6''' reactions in the full pathway
−
* Reaction: [[RXN-18229]]
+
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Assignment: automated-name-match
+
*** Tool: [[pathwaytools]]
−
== Pathways associated ==
+
−
* [[PWY-581]]
+
−
* [[PWY-5026]]
+
−
* [[PWYQT-4476]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: right end position=6707}}
+
* RHEA:
−
{{#set: transcription direction=POSITIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18073 18073]
−
{{#set: left end position=4886}}
+
* LIGAND-RXN:
−
{{#set: centisome position=60.068848    }}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01868 R01868]
−
{{#set: reaction associated=3.5.5.1-RXN|RXN-1404|RXN-17607|RXN-18229}}
+
* UNIPROT:
−
{{#set: pathway associated=PWY-581|PWY-5026|PWYQT-4476}}
+
** [http://www.uniprot.org/uniprot/O76140 O76140]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=ORF}}
 +
{{#set: ec number=EC-1.3.5.2}}
 +
{{#set: gene associated=Tiso_gene_4735|Tiso_gene_5280}}
 +
{{#set: in pathway=PWY-5686}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 21:21, 21 March 2018

Reaction DIHYDROOROTATE-DEHYDROGENASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (S)-dihydroorotate[c] + 1 an electron-transfer quinone[c] => 1 orotate[c] + 1 an electron-transfer quinol[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5686, UMP biosynthesis I: PWY-5686
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=DIHYDROOROTATE-DEHYDROGENASE-RXN&oldid=48034"