Difference between revisions of "GLUTAMATE-SYNTHASE-FERREDOXIN-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_4615 == * left end position: ** 12189 * transcription direction: ** NEGATIVE * right end position: ** 14665 * centisome position: ** 83.087...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMATE-SYNTHASE-FERREDOXIN-RXN GLUTAMATE-SYNTHASE-FERREDOXIN-RXN] == * direction: ** LEFT-TO-RIG...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_4615 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMATE-SYNTHASE-FERREDOXIN-RXN GLUTAMATE-SYNTHASE-FERREDOXIN-RXN] ==
−
* left end position:
+
* direction:
−
** 12189
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** NEGATIVE
+
** ferredoxin-dependent_glutamate_synthase
−
* right end position:
+
* ec number:
−
** 14665
+
** [http://enzyme.expasy.org/EC/1.4.7.1 EC-1.4.7.1]
−
* centisome position:
+
−
** 83.08794   
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[ALPHAGALACTOSID-RXN]]
+
* With identifiers:
−
** in-silico_annotation
+
** 1 [[2-KETOGLUTARATE]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[GLN]][c] '''=>''' 2 [[Oxidized-ferredoxins]][c] '''+''' 2 [[GLT]][c]
−
***automated-name-match
+
* With common name(s):
−
** [[pantograph]]-[[creinhardtii]]
+
** 1 2-oxoglutarate[c] '''+''' 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''+''' 2 H+[c] '''+''' 1 L-glutamine[c] '''=>''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c] '''+''' 2 L-glutamate[c]
−
* [[RXN-11501]]
+
 
−
** in-silico_annotation
+
== Genes associated with this reaction  ==
−
***automated-name-match
+
Genes have been associated with this reaction based on different elements listed below.
−
** [[pantograph]]-[[creinhardtii]]
+
* Gene: [[Tiso_gene_1773]]
−
* [[RXN-11502]]
+
** Source: [[annotation-in-silico_annotation]]
−
** in-silico_annotation
+
*** Assignment: AUTOMATED-NAME-MATCH
−
***automated-name-match
+
* Gene: [[Tiso_gene_2581]]
−
** [[pantograph]]-[[creinhardtii]]
+
** Source: [[orthology-athaliana]]
−
* [[RXN-12088]]
+
** Source: [[orthology-esiliculosus]]
−
** in-silico_annotation
+
* Gene: [[Tiso_gene_1154]]
−
***automated-name-match
+
** Source: [[annotation-experimental_annotation]]
−
* [[RXN-17754]]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** in-silico_annotation
+
** Source: [[orthology-athaliana]]
−
***automated-name-match
+
** Source: [[orthology-synechocystis]]
−
* [[RXN-17830]]
+
** Source: [[orthology-esiliculosus]]
−
** in-silico_annotation
+
== Pathways  ==
−
***automated-name-match
+
* [[PWY-6964]], ammonia assimilation cycle II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6964 PWY-6964]
−
== Pathways associated ==
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-6527]]
+
* [[PWY-4341]], L-glutamate biosynthesis V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4341 PWY-4341]
−
* [[PWY0-1301]]
+
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-6549]], L-glutamine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6549 PWY-6549]
 +
** '''6''' reactions found over '''9''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-synechocystis]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=12189}}
+
* LIGAND-RXN:
−
{{#set: transcription direction=NEGATIVE}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00021 R00021]
−
{{#set: right end position=14665}}
+
* UNIPROT:
−
{{#set: centisome position=83.08794    }}
+
** [http://www.uniprot.org/uniprot/P23225 P23225]
−
{{#set: reaction associated=ALPHAGALACTOSID-RXN|RXN-11501|RXN-11502|RXN-12088|RXN-17754|RXN-17830}}
+
** [http://www.uniprot.org/uniprot/O67512 O67512]
−
{{#set: pathway associated=PWY-6527|PWY0-1301}}
+
** [http://www.uniprot.org/uniprot/P96218 P96218]
 +
** [http://www.uniprot.org/uniprot/Q06434 Q06434]
 +
** [http://www.uniprot.org/uniprot/Q43081 Q43081]
 +
** [http://www.uniprot.org/uniprot/P55037 P55037]
 +
** [http://www.uniprot.org/uniprot/Q43155 Q43155]
 +
** [http://www.uniprot.org/uniprot/Q7M242 Q7M242]
 +
** [http://www.uniprot.org/uniprot/P51375 P51375]
 +
** [http://www.uniprot.org/uniprot/P55038 P55038]
 +
** [http://www.uniprot.org/uniprot/Q9SLM4 Q9SLM4]
 +
** [http://www.uniprot.org/uniprot/Q08258 Q08258]
 +
** [http://www.uniprot.org/uniprot/O49154 O49154]
 +
** [http://www.uniprot.org/uniprot/O19906 O19906]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=ferredoxin-dependent_glutamate_synthase}}
 +
{{#set: ec number=EC-1.4.7.1}}
 +
{{#set: gene associated=Tiso_gene_1773|Tiso_gene_2581|Tiso_gene_1154}}
 +
{{#set: in pathway=PWY-6964|PWY-4341|PWY-6549}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|orthology-athaliana|annotation-in-silico_annotation|orthology-synechocystis|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:21, 21 March 2018

Reaction GLUTAMATE-SYNTHASE-FERREDOXIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ferredoxin-dependent_glutamate_synthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6964, ammonia assimilation cycle II: PWY-6964
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-4341, L-glutamate biosynthesis V: PWY-4341
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-6549, L-glutamine biosynthesis III: PWY-6549
    • 6 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=GLUTAMATE-SYNTHASE-FERREDOXIN-RXN&oldid=48040"