Difference between revisions of "HISTPRATPHYD-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_6952 == * left end position: ** 2786 * transcription direction: ** POSITIVE * right end position: ** 5460 * centisome position: ** 23.90800...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTPRATPHYD-RXN HISTPRATPHYD-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme....")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_6952 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTPRATPHYD-RXN HISTPRATPHYD-RXN] ==
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* left end position:
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* direction:
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** 2786
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** LEFT-TO-RIGHT
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* transcription direction:
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* ec number:
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** POSITIVE
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** [http://enzyme.expasy.org/EC/3.6.1.31 EC-3.6.1.31]
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* right end position:
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** 5460
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* centisome position:
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** 23.908007   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[HYDROXYPYRROLINEDEH-RXN]]
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* With identifiers:
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** [[pantograph]]-[[synechocystis]]
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** 1 [[PHOSPHORIBOSYL-ATP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PPI]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[PHOSPHORIBOSYL-AMP]][c]
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* [[PYRROLINECARBDEHYDROG-RXN]]
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* With common name(s):
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** [[pantograph]]-[[synechocystis]]
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** 1 1-(5-phospho-β-D-ribosyl)-ATP[c] '''+''' 1 H2O[c] '''=>''' 1 diphosphate[c] '''+''' 2 H+[c] '''+''' 1 1-(5-phospho-β-D-ribosyl)-AMP[c]
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* [[RXN-14116]]
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** [[pantograph]]-[[synechocystis]]
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== Genes associated with this reaction  ==
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* [[SSNOm]]
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Genes have been associated with this reaction based on different elements listed below.
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** [[pantograph]]-[[creinhardtii]]
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* Gene: [[Tiso_gene_11297]]
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* [[SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN]]
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** Source: [[orthology-athaliana]]
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** in-silico_annotation
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** Source: [[orthology-synechocystis]]
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***ec-number
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** Source: [[orthology-esiliculosus]]
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** experimental_annotation
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** Source: [[orthology-creinhardtii]]
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***ec-number
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== Pathways ==
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** [[pantograph]]-[[creinhardtii]]
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* [[HISTSYN-PWY]], L-histidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HISTSYN-PWY HISTSYN-PWY]
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* [[SUCCSEMIALDDEHYDROG-RXN]]
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** '''10''' reactions found over '''10''' reactions in the full pathway
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** [[pantograph]]-[[synechocystis]]
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== Reconstruction information  ==
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== Pathways associated ==
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* Category: [[orthology]]
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* [[ARGASEDEG-PWY]]
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** Source: [[orthology-athaliana]]
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* [[PWY-6853]]
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*** Tool: [[pantograph]]
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* [[PWY-4321]]
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** Source: [[orthology-creinhardtii]]
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* [[PROUT-PWY]]
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*** Tool: [[pantograph]]
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* [[P181-PWY]]
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** Source: [[orthology-synechocystis]]
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* [[PWY-6993]]
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*** Tool: [[pantograph]]
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* [[PWY-6537]]
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** Source: [[orthology-esiliculosus]]
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* [[PWY-6473]]
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*** Tool: [[pantograph]]
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* [[PWY-6535]]
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* Category: [[manual]]
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* [[GLUDEG-I-PWY]]
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** Source: [[manual-primary_network]]
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* [[3-HYDROXYPHENYLACETATE-DEGRADATION-PWY]]
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−
* [[P105-PWY]]
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== External links  ==
 
== External links  ==
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{{#set: left end position=2786}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22828 22828]
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{{#set: right end position=5460}}
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* LIGAND-RXN:
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{{#set: centisome position=23.908007    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R04035 R04035]
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{{#set: reaction associated=HYDROXYPYRROLINEDEH-RXN|PYRROLINECARBDEHYDROG-RXN|RXN-14116|SSNOm|SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN|SUCCSEMIALDDEHYDROG-RXN}}
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* UNIPROT:
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{{#set: pathway associated=ARGASEDEG-PWY|PWY-6853|PWY-4321|PROUT-PWY|P181-PWY|PWY-6993|PWY-6537|PWY-6473|PWY-6535|GLUDEG-I-PWY|3-HYDROXYPHENYLACETATE-DEGRADATION-PWY|P105-PWY}}
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** [http://www.uniprot.org/uniprot/P44434 P44434]
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** [http://www.uniprot.org/uniprot/Q9X0C5 Q9X0C5]
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** [http://www.uniprot.org/uniprot/Q9PM71 Q9PM71]
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** [http://www.uniprot.org/uniprot/Q02130 Q02130]
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** [http://www.uniprot.org/uniprot/Q9RWD6 Q9RWD6]
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** [http://www.uniprot.org/uniprot/Q9K0J4 Q9K0J4]
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** [http://www.uniprot.org/uniprot/O34912 O34912]
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** [http://www.uniprot.org/uniprot/P0A5B1 P0A5B1]
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** [http://www.uniprot.org/uniprot/Q9KSW7 Q9KSW7]
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** [http://www.uniprot.org/uniprot/Q9HUB6 Q9HUB6]
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** [http://www.uniprot.org/uniprot/Q57750 Q57750]
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** [http://www.uniprot.org/uniprot/O27344 O27344]
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** [http://www.uniprot.org/uniprot/Q9JVJ9 Q9JVJ9]
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** [http://www.uniprot.org/uniprot/O67780 O67780]
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** [http://www.uniprot.org/uniprot/Q9PBD1 Q9PBD1]
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** [http://www.uniprot.org/uniprot/P26722 P26722]
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** [http://www.uniprot.org/uniprot/P45353 P45353]
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** [http://www.uniprot.org/uniprot/Q12670 Q12670]
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** [http://www.uniprot.org/uniprot/P50935 P50935]
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** [http://www.uniprot.org/uniprot/P00815 P00815]
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** [http://www.uniprot.org/uniprot/P07685 P07685]
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** [http://www.uniprot.org/uniprot/O59667 O59667]
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** [http://www.uniprot.org/uniprot/O82768 O82768]
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** [http://www.uniprot.org/uniprot/P10367 P10367]
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** [http://www.uniprot.org/uniprot/P06989 P06989]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-3.6.1.31}}
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{{#set: gene associated=Tiso_gene_11297}}
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{{#set: in pathway=HISTSYN-PWY}}
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{{#set: reconstruction category=orthology|manual}}
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{{#set: reconstruction source=orthology-athaliana|orthology-creinhardtii|orthology-synechocystis|orthology-esiliculosus|manual-primary_network}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 21:21, 21 March 2018

Reaction HISTPRATPHYD-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=HISTPRATPHYD-RXN&oldid=48088"