Difference between revisions of "Tiso gene 17637"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13431 RXN-13431] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Gene == Gene Tiso_gene_17637 == * right end position: ** 3472 * transcription direction: ** NEGATIVE * left end position: ** 2381 * centisome position: ** 66.8257...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13431 RXN-13431] ==
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== Gene Tiso_gene_17637 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 3472
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/2.3.1 EC-2.3.1]
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** NEGATIVE
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* left end position:
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** 2381
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* centisome position:
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** 66.82570   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PHOSPHORIBULOKINASE-RXN]]
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** 21 [[PROTON]][c] '''+''' 1 [[ACETYL-COA]][c] '''+''' 13 [[NADPH]][c] '''+''' 9 [[MALONYL-COA]][c] '''=>''' 1 [[5Z8Z11Z14Z17Z-EICOSAPENTAENOATE]][c] '''+''' 8 [[WATER]][c] '''+''' 9 [[CARBON-DIOXIDE]][c] '''+''' 10 [[CO-A]][c] '''+''' 13 [[NADP]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 21 H+[c] '''+''' 1 acetyl-CoA[c] '''+''' 13 NADPH[c] '''+''' 9 malonyl-CoA[c] '''=>''' 1 icosapentaenoate[c] '''+''' 8 H2O[c] '''+''' 9 CO2[c] '''+''' 10 coenzyme A[c] '''+''' 13 NADP+[c]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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== Genes associated with this reaction  ==
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** Source: [[orthology-athaliana]]
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== Pathways  ==
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** Source: [[orthology-athaliana]]
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* [[PWY-7050]], icosapentaenoate biosynthesis IV (bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7050 PWY-7050]
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** Source: [[orthology-synechocystis]]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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** Source: [[orthology-esiliculosus]]
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== Reconstruction information  ==
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** Source: [[orthology-creinhardtii]]
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* Category: [[gap-filling]]
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== Pathways associated ==
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** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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* [[CALVIN-PWY]]
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*** Tool: [[meneco]]
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* [[PWY-5723]]
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**** Comment: [[added for gapfilling]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=3472}}
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{{#set: ec number=EC-2.3.1}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: in pathway=PWY-7050}}
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{{#set: left end position=2381}}
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{{#set: reconstruction category=gap-filling}}
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{{#set: centisome position=66.82570    }}
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{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
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{{#set: reaction associated=PHOSPHORIBULOKINASE-RXN}}
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{{#set: reconstruction tool=meneco}}
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{{#set: pathway associated=CALVIN-PWY|PWY-5723}}
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{{#set: reconstruction comment=added for gapfilling}}
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Latest revision as of 21:21, 21 March 2018

Gene Tiso_gene_17637

  • right end position:
    • 3472
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 2381
  • centisome position:
    • 66.82570
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_17637&oldid=48089"