Difference between revisions of "RXN0-5330"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=IMPCYCLOHYDROLASE-RXN IMPCYCLOHYDROLASE-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5330 RXN0-5330] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=IMPCYCLOHYDROLASE-RXN IMPCYCLOHYDROLASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5330 RXN0-5330] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.5.4.10 EC-3.5.4.10]
+
** [http://enzyme.expasy.org/EC/1.6.5.9 EC-1.6.5.9]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[IMP]][c] '''<=>''' 1 [[PHOSPHORIBOSYL-FORMAMIDO-CARBOXAMIDE]][c]
+
** 1 [[Ubiquinones]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NAD]][c] '''+''' 1 [[Ubiquinols]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 IMP[c] '''<=>''' 1 5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide[c]
+
** 1 a ubiquinone[c] '''+''' 1 NADH[c] '''+''' 1 H+[c] '''=>''' 1 NAD+[c] '''+''' 1 an ubiquinol[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_18420]]
+
* Gene: [[Tiso_gene_18172]]
−
** [[pantograph]]-[[athaliana]]
+
** Source: [[orthology-esiliculosus]]
−
** [[pantograph]]-[[synechocystis]]
+
* Gene: [[Tiso_gene_18831]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[orthology-esiliculosus]]
−
** [[pantograph]]-[[creinhardtii]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6123]], inosine-5'-phosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6123 PWY-6123]
+
* [[PWY0-1573]], nitrate reduction VIIIb (dissimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1573 PWY0-1573]
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-6124]], inosine-5'-phosphate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6124 PWY-6124]
+
* [[PWY0-1567]], NADH to cytochrome bo oxidase electron transfer II: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1567 PWY0-1567]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-7234]], inosine-5'-phosphate biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7234 PWY-7234]
+
* [[PWY0-1568]], NADH to cytochrome bd oxidase electron transfer II: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1568 PWY0-1568]
−
** '''4''' reactions found over '''6''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7269]], NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7269 PWY-7269]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7279]], aerobic respiration II (cytochrome c) (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7279 PWY-7279]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-athaliana]]
 
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-creinhardtii]]
 
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-synechocystis]]
 
−
*** Tool: [[pantograph]]
 
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
* Category: [[manual]]
 
−
** Source: [[manual-primary_network]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18445 18445]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23152 23152]
−
* LIGAND-RXN:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01127 R01127]
+
{{#set: ec number=EC-1.6.5.9}}
−
* UNIPROT:
+
{{#set: gene associated=Tiso_gene_18172|Tiso_gene_18831}}
−
** [http://www.uniprot.org/uniprot/P43852 P43852]
+
{{#set: in pathway=PWY0-1573|PWY0-1567|PWY0-1568|PWY-7269|PWY-7279}}
−
** [http://www.uniprot.org/uniprot/P12048 P12048]
+
{{#set: reconstruction category=orthology|annotation}}
−
** [http://www.uniprot.org/uniprot/P31335 P31335]
+
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
−
** [http://www.uniprot.org/uniprot/P26978 P26978]
+
−
** [http://www.uniprot.org/uniprot/P15639 P15639]
+
−
** [http://www.uniprot.org/uniprot/Q9PNY2 Q9PNY2]
+
−
** [http://www.uniprot.org/uniprot/Q9JUQ8 Q9JUQ8]
+
−
** [http://www.uniprot.org/uniprot/P31939 P31939]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: ec number=EC-3.5.4.10}}
+
−
{{#set: gene associated=Tiso_gene_18420}}
+
−
{{#set: in pathway=PWY-6123|PWY-6124|PWY-7234}}
+
−
{{#set: reconstruction category=orthology|manual|annotation}}
+
−
{{#set: reconstruction source=orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
+
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 21:21, 21 March 2018

Reaction RXN0-5330

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a ubiquinone[c] + 1 NADH[c] + 1 H+[c] => 1 NAD+[c] + 1 an ubiquinol[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-1573, nitrate reduction VIIIb (dissimilatory): PWY0-1573
    • 1 reactions found over 2 reactions in the full pathway
  • PWY0-1567, NADH to cytochrome bo oxidase electron transfer II: PWY0-1567
    • 1 reactions found over 2 reactions in the full pathway
  • PWY0-1568, NADH to cytochrome bd oxidase electron transfer II: PWY0-1568
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7269, NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast): PWY-7269
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-7279, aerobic respiration II (cytochrome c) (yeast): PWY-7279
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN0-5330&oldid=48109"