Difference between revisions of "Tiso gene 10001"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.225-RXN 2.4.1.225-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** exostosin-1 * ec nu...")
 
(Created page with "Category:Gene == Gene Tiso_gene_10001 == * Synonym(s): == Reactions associated == * Reaction: 3.2.1.21-RXN ** Source: orthology-esiliculosus * Reaction: RXN-107...")
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.225-RXN 2.4.1.225-RXN] ==
+
== Gene Tiso_gene_10001 ==
−
* direction:
+
−
** LEFT-TO-RIGHT
+
−
* common name:
+
−
** exostosin-1
+
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/2.4.1.225 EC-2.4.1.225]
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[3.2.1.21-RXN]]
−
** 1 [[GlcNAc-GlcA-Gal-Gal-Xyl-Protein]][c] '''+''' 1 [[UDP-GLUCURONATE]][c] '''=>''' 1 [[GlcA-GlcNAc-GlcA-Gal-Gal-Xyl-Protein]][c] '''+''' 1 [[UDP]][c] '''+''' 1 [[PROTON]][c]
+
** Source: [[orthology-esiliculosus]]
−
* With common name(s):
+
* Reaction: [[RXN-10769]]
−
** 1 a [protein]-3-O-(α-D-GlcNAc-(1→4)-β-D-GlcA-(1→3)-β-D-Gal-(1→3)-β-D-Gal-(1→4)-β-D-Xyl)-L-serine[c] '''+''' 1 UDP-α-D-glucuronate[c] '''=>''' 1 a [protein]-3-O-(β-D-GlcA-(1→3)-α-D-GlcNAc-(1→4)-β-D-GlcA-(1→3)-β-D-Gal-(1→3)-β-D-Gal-(1→4)-β-D-Xyl)-L-serine[c] '''+''' 1 UDP[c] '''+''' 1 H+[c]
+
** Source: [[orthology-esiliculosus]]
−
 
+
* Reaction: [[RXN-10773]]
−
== Genes associated with this reaction  ==
+
** Source: [[orthology-esiliculosus]]
−
Genes have been associated with this reaction based on different elements listed below.
+
* Reaction: [[RXN-13600]]
−
* [[Tiso_gene_6495]]
+
** Source: [[orthology-esiliculosus]]
−
** IN-SILICO_ANNOTATION
+
* Reaction: [[RXN-13602]]
−
***EC-NUMBER
+
** Source: [[orthology-esiliculosus]]
−
== Pathways ==
+
* Reaction: [[RXN-13603]]
−
* [[PWY-6558]], heparan sulfate biosynthesis (late stages): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6558 PWY-6558]
+
** Source: [[orthology-esiliculosus]]
−
** '''3''' reactions found over '''13''' reactions in the full pathway
+
* Reaction: [[RXN-14179]]
−
== Reconstruction information  ==
+
** Source: [[orthology-esiliculosus]]
−
* [[annotation]]:
+
* Reaction: [[RXN-5341]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-esiliculosus]]
−
*** [[in-silico_annotation]]
+
* Reaction: [[RXN-8036]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Reaction: [[RXN-9674]]
 +
** Source: [[orthology-esiliculosus]]
 +
== Pathways associated ==
 +
* [[PWY-3121]]
 +
* [[PWY-6002]]
 +
* [[PWY-6788]]
 +
* [[PWY-5176]]
 +
* [[PWY-7092]]
 +
* [[PWY-7091]]
 +
* [[PWY-7089]]
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: reaction associated=3.2.1.21-RXN|RXN-10769|RXN-10773|RXN-13600|RXN-13602|RXN-13603|RXN-14179|RXN-5341|RXN-8036|RXN-9674}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R07335 R07335]
+
{{#set: pathway associated=PWY-3121|PWY-6002|PWY-6788|PWY-5176|PWY-7092|PWY-7091|PWY-7089}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=exostosin-1}}
+
−
{{#set: ec number=EC-2.4.1.225}}
+
−
{{#set: gene associated=Tiso_gene_6495}}
+
−
{{#set: in pathway=PWY-6558}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Latest revision as of 20:22, 21 March 2018

Gene Tiso_gene_10001

  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_10001&oldid=48169"