Difference between revisions of "Tiso gene 14984"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15288 RXN-15288] == * direction: ** LEFT-TO-RIGHT * common name: ** luteolin-7-O-diglucuronide...")
(Created page with "Category:Gene == Gene Tiso_gene_14984 == * right end position: ** 5089 * transcription direction: ** NEGATIVE * left end position: ** 3186 * centisome position: ** 60.0678...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15288 RXN-15288] ==
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== Gene Tiso_gene_14984 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 5089
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* common name:
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* transcription direction:
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** luteolin-7-O-diglucuronide peroxidase
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** NEGATIVE
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** ascorbate_peroxidase
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* left end position:
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** ORF
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** 3186
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/1.11.1.7 EC-1.11.1.7]
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** 60.067875   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[BRANCHED-CHAINAMINOTRANSFERILEU-RXN]]
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** 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 2 [[LUTEOLIN-7-O-BETA-D-DIGLUCURONIDE]][c] '''=>''' 2 [[a-radical-of-luteolin-7-iOi-diglucuronid]][c] '''+''' 2 [[WATER]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 hydrogen peroxide[c] '''+''' 2 luteolin 7-O-β-D-diglucuronide[c] '''=>''' 2 a radical of luteolin-7-O-diglucuronide[c] '''+''' 2 H2O[c]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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== Genes associated with this reaction  ==
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** Source: [[orthology-athaliana]]
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[orthology-synechocystis]]
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* [[Tiso_gene_11016]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_15820]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_16028]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_5857]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_6431]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_20206]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_19683]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_9359]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_15962]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_17551]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_7067]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-7445]], luteolin triglucuronide degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7445 PWY-7445]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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* Category: [[annotation]]
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* Reaction: [[BRANCHED-CHAINAMINOTRANSFERLEU-RXN]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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** Source: [[orthology-synechocystis]]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[BRANCHED-CHAINAMINOTRANSFERVAL-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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** Source: [[orthology-synechocystis]]
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** Source: [[orthology-esiliculosus]]
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== Pathways associated ==
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* [[ILEUSYN-PWY]]
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* [[ILEUDEG-PWY]]
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* [[LEU-DEG2-PWY]]
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* [[VALDEG-PWY]]
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* [[PWY-5057]]
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* [[VALSYN-PWY]]
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* [[PWY-7767]]
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* [[PWY-5108]]
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* [[PWY-5076]]
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* [[PWY-5103]]
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* [[PWY-5101]]
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* [[PWY-5078]]
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* [[ALANINE-VALINESYN-PWY]]
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* [[LEUSYN-PWY]]
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* [[PWY-5104]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=5089}}
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{{#set: common name=luteolin-7-O-diglucuronide peroxidase}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=ascorbate_peroxidase}}
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{{#set: left end position=3186}}
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{{#set: common name=ORF}}
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{{#set: centisome position=60.067875    }}
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{{#set: ec number=EC-1.11.1.7}}
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{{#set: reaction associated=BRANCHED-CHAINAMINOTRANSFERILEU-RXN|BRANCHED-CHAINAMINOTRANSFERLEU-RXN|BRANCHED-CHAINAMINOTRANSFERVAL-RXN}}
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{{#set: gene associated=Tiso_gene_11016|Tiso_gene_15820|Tiso_gene_16028|Tiso_gene_5857|Tiso_gene_6431|Tiso_gene_20206|Tiso_gene_19683|Tiso_gene_9359|Tiso_gene_15962|Tiso_gene_17551|Tiso_gene_7067}}
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{{#set: pathway associated=ILEUSYN-PWY|ILEUDEG-PWY|LEU-DEG2-PWY|VALDEG-PWY|PWY-5057|VALSYN-PWY|PWY-7767|PWY-5108|PWY-5076|PWY-5103|PWY-5101|PWY-5078|ALANINE-VALINESYN-PWY|LEUSYN-PWY|PWY-5104}}
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{{#set: in pathway=PWY-7445}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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−
{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 21:22, 21 March 2018

Gene Tiso_gene_14984

  • right end position:
    • 5089
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 3186
  • centisome position:
    • 60.067875
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_14984&oldid=48232"