Difference between revisions of "Tiso gene 14984"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-23 RXN66-23] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
 
(Created page with "Category:Gene == Gene Tiso_gene_14984 == * right end position: ** 5089 * transcription direction: ** NEGATIVE * left end position: ** 3186 * centisome position: ** 60.0678...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-23 RXN66-23] ==
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== Gene Tiso_gene_14984 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 5089
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.1.1.170 EC-1.1.1.170]
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** NEGATIVE
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* left end position:
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** 3186
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* centisome position:
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** 60.067875   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[BRANCHED-CHAINAMINOTRANSFERILEU-RXN]]
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** 1 [[CPD-8619]][c] '''+''' 1 [[NAD-P-OR-NOP]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD-8620]][c] '''+''' 1 [[NADH-P-OR-NOP]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 4α-carboxy-5α-cholesta-8-en-3β-ol[c] '''+''' 1 NAD(P)+[c] '''=>''' 1 CO2[c] '''+''' 1 5α-cholesta-8-en-3-one[c] '''+''' 1 NAD(P)H[c]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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== Genes associated with this reaction  ==
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** Source: [[orthology-athaliana]]
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[orthology-synechocystis]]
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* [[Tiso_gene_897]]
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** Source: [[orthology-esiliculosus]]
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** [[pantograph]]-[[esiliculosus]]
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** Source: [[orthology-creinhardtii]]
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== Pathways ==
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* Reaction: [[BRANCHED-CHAINAMINOTRANSFERLEU-RXN]]
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* [[PWY66-3]], cholesterol biosynthesis II (via 24,25-dihydrolanosterol): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-3 PWY66-3]
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** Source: [[annotation-in-silico_annotation]]
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** '''8''' reactions found over '''22''' reactions in the full pathway
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*** Assignment: ec-number
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== Reconstruction information  ==
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** Source: [[annotation-experimental_annotation]]
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* [[orthology]]:
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*** Assignment: ec-number
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** [[pantograph]]:
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** Source: [[orthology-synechocystis]]
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*** [[esiliculosus]]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[BRANCHED-CHAINAMINOTRANSFERVAL-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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** Source: [[orthology-synechocystis]]
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** Source: [[orthology-esiliculosus]]
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== Pathways associated ==
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* [[ILEUSYN-PWY]]
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* [[ILEUDEG-PWY]]
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* [[LEU-DEG2-PWY]]
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* [[VALDEG-PWY]]
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* [[PWY-5057]]
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* [[VALSYN-PWY]]
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* [[PWY-7767]]
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* [[PWY-5108]]
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* [[PWY-5076]]
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* [[PWY-5103]]
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* [[PWY-5101]]
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* [[PWY-5078]]
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* [[ALANINE-VALINESYN-PWY]]
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* [[LEUSYN-PWY]]
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* [[PWY-5104]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=5089}}
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{{#set: ec number=EC-1.1.1.170}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: gene associated=Tiso_gene_897}}
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{{#set: left end position=3186}}
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{{#set: in pathway=PWY66-3}}
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{{#set: centisome position=60.067875    }}
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{{#set: reconstruction category=orthology}}
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{{#set: reaction associated=BRANCHED-CHAINAMINOTRANSFERILEU-RXN|BRANCHED-CHAINAMINOTRANSFERLEU-RXN|BRANCHED-CHAINAMINOTRANSFERVAL-RXN}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: pathway associated=ILEUSYN-PWY|ILEUDEG-PWY|LEU-DEG2-PWY|VALDEG-PWY|PWY-5057|VALSYN-PWY|PWY-7767|PWY-5108|PWY-5076|PWY-5103|PWY-5101|PWY-5078|ALANINE-VALINESYN-PWY|LEUSYN-PWY|PWY-5104}}
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{{#set: reconstruction source=esiliculosus}}
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Latest revision as of 20:22, 21 March 2018

Gene Tiso_gene_14984

  • right end position:
    • 5089
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 3186
  • centisome position:
    • 60.067875
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_14984&oldid=48232"