Difference between revisions of "Tiso gene 3974"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.21.89-RXN 3.4.21.89-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy...")
(Created page with "Category:Gene == Gene Tiso_gene_3974 == * right end position: ** 7701 * transcription direction: ** POSITIVE * left end position: ** 5259 * centisome position: ** 20.22614...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.21.89-RXN 3.4.21.89-RXN] ==
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== Gene Tiso_gene_3974 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 7701
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/3.4.21.89 EC-3.4.21.89]
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** POSITIVE
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* left end position:
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** 5259
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* centisome position:
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** 20.226145   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3-DEHYDROQUINATE-SYNTHASE-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[Peptides-with-Leader-Sequence]][c] '''=>''' 1 [[Leader-Sequences]][c] '''+''' 1 [[Peptides-holder]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 H2O[c] '''+''' 1 a peptide with a leader sequence[c] '''=>''' 1 a leader sequence[c] '''+''' 1 a peptide[c]
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-synechocystis]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_14208]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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* Reaction: [[SHIKIMATE-KINASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-6164]]
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* [[PWY-6163]]
 
== External links  ==
 
== External links  ==
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* UNIPROT:
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{{#set: right end position=7701}}
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** [http://www.uniprot.org/uniprot/Q9RUF9 Q9RUF9]
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{{#set: transcription direction=POSITIVE}}
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** [http://www.uniprot.org/uniprot/Q9ZE32 Q9ZE32]
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{{#set: left end position=5259}}
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** [http://www.uniprot.org/uniprot/Q9CDG2 Q9CDG2]
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{{#set: centisome position=20.226145    }}
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** [http://www.uniprot.org/uniprot/Q9KPB1 Q9KPB1]
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{{#set: reaction associated=3-DEHYDROQUINATE-SYNTHASE-RXN|SHIKIMATE-KINASE-RXN}}
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** [http://www.uniprot.org/uniprot/Q9PBA0 Q9PBA0]
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{{#set: pathway associated=PWY-6164|PWY-6163}}
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** [http://www.uniprot.org/uniprot/Q57708 Q57708]
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** [http://www.uniprot.org/uniprot/O67088 O67088]
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** [http://www.uniprot.org/uniprot/Q9JV66 Q9JV66]
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** [http://www.uniprot.org/uniprot/Q9PP67 Q9PP67]
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** [http://www.uniprot.org/uniprot/Q9I5G7 Q9I5G7]
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** [http://www.uniprot.org/uniprot/Q8FF16 Q8FF16]
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** [http://www.uniprot.org/uniprot/Q8XA33 Q8XA33]
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** [http://www.uniprot.org/uniprot/P41026 P41026]
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** [http://www.uniprot.org/uniprot/P41027 P41027]
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** [http://www.uniprot.org/uniprot/P37943 P37943]
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** [http://www.uniprot.org/uniprot/Q57350 Q57350]
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** [http://www.uniprot.org/uniprot/Q7M0V9 Q7M0V9]
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** [http://www.uniprot.org/uniprot/P0A1W2 P0A1W2]
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** [http://www.uniprot.org/uniprot/P26844 P26844]
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** [http://www.uniprot.org/uniprot/P28628 P28628]
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** [http://www.uniprot.org/uniprot/P41025 P41025]
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** [http://www.uniprot.org/uniprot/Q51876 Q51876]
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** [http://www.uniprot.org/uniprot/Q52697 Q52697]
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** [http://www.uniprot.org/uniprot/Q45225 Q45225]
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** [http://www.uniprot.org/uniprot/P72660 P72660]
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** [http://www.uniprot.org/uniprot/P73157 P73157]
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** [http://www.uniprot.org/uniprot/O69884 O69884]
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** [http://www.uniprot.org/uniprot/P00803 P00803]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-3.4.21.89}}
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{{#set: gene associated=Tiso_gene_14208}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 20:22, 21 March 2018

Gene Tiso_gene_3974

  • right end position:
    • 7701
  • transcription direction:
    • POSITIVE
  • left end position:
    • 5259
  • centisome position:
    • 20.226145
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_3974&oldid=48256"