Difference between revisions of "OrDC"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13443 RXN-13443] == * direction: ** LEFT-TO-RIGHT * common name: ** chloroplast_beta-keto_acyl_...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=orDC orDC] == * direction: ** LEFT-TO-RIGHT * common name: ** ornithine decarboxylase * Synonym(s):...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13443 RXN-13443] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=orDC orDC] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** chloroplast_beta-keto_acyl_reductase
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** ornithine decarboxylase
* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.330 EC-1.1.1.330]
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* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[CPD-14423]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-14424]][c] '''+''' 1 [[NAD-P-OR-NOP]][c]
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** 1.0 [[L-ORNITHINE]][c] '''+''' 1.0 [[PROTON]][c] '''=>''' 1.0 [[CARBON-DIOXIDE]][c] '''+''' 1.0 [[PUTRESCINE]][c]
 
* With common name(s):
 
* With common name(s):
** 1 NAD(P)H[c] '''+''' 1 3-oxo-docosapentaenoyl-CoA[c] '''+''' 1 H+[c] '''=>''' 1 (5Z,8Z,11Z,14Z,17Z)-3R-hydroxy-docosapentaenoyl-CoA[c] '''+''' 1 NAD(P)+[c]
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** 1.0 L-ornithine[c] '''+''' 1.0 H+[c] '''=>''' 1.0 CO2[c] '''+''' 1.0 putrescine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[Tiso_gene_9871]]
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* Gene: [[Tiso_gene_10737]]
** IN-SILICO_ANNOTATION
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** Source: [[orthology-creinhardtii]]
***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_9885]]
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_13083]]
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
 
== Pathways  ==
* [[PWY-7053]], docosahexaenoate biosynthesis I (lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7053 PWY-7053]
 
** '''4''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7606 PWY-7606]
 
** '''14''' reactions found over '''14''' reactions in the full pathway
 
* [[PWY-7727]], docosahexaenoate biosynthesis IV (4-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7727 PWY-7727]
 
** '''5''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
** Source: [[orthology-esiliculosus]]
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** Source: [[orthology-creinhardtii]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
* Category: [[annotation]]
 
** Source: [[annotation-experimental_annotation]]
 
*** Tool: [[pathwaytools]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
 
== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=chloroplast_beta-keto_acyl_reductase}}
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{{#set: common name=ornithine decarboxylase}}
{{#set: ec number=EC-1.1.1.330}}
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{{#set: gene associated=Tiso_gene_10737}}
{{#set: gene associated=Tiso_gene_9871|Tiso_gene_9885|Tiso_gene_13083}}
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{{#set: in pathway=}}
{{#set: in pathway=PWY-7053|PWY-7606|PWY-7727}}
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{{#set: reconstruction category=orthology}}
{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-creinhardtii}}
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 21:23, 21 March 2018

Reaction orDC

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ornithine decarboxylase
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links