Difference between revisions of "Tiso gene 674"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RETINOL-DEHYDROGENASE-RXN RETINOL-DEHYDROGENASE-RXN] == * direction: ** REVERSIBLE * common name: *...")
(Created page with "Category:Gene == Gene Tiso_gene_674 == * right end position: ** 30124 * transcription direction: ** NEGATIVE * left end position: ** 11680 * centisome position: ** 38.7088...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RETINOL-DEHYDROGENASE-RXN RETINOL-DEHYDROGENASE-RXN] ==
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== Gene Tiso_gene_674 ==
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* direction:
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* right end position:
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** REVERSIBLE
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** 30124
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* common name:
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* transcription direction:
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** all-trans-retinol dehydrogenase (NAD)
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** NEGATIVE
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** dehydrogenase_reductase_sdr_family_member_on_chromosome_x-like
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* left end position:
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* ec number:
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** 11680
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** [http://enzyme.expasy.org/EC/1.1.1.105 EC-1.1.1.105]
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* centisome position:
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** 38.70882   
 
* Synonym(s):
 
* Synonym(s):
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** all-trans retinol dehydrogenase
 
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** retinal reductase
 
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ATPASE-RXN]]
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** 1 [[CPD-13524]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[RETINAL]][c] '''+''' 1 [[NADH]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 all-trans-retinol[c] '''+''' 1 NAD+[c] '''<=>''' 1 H+[c] '''+''' 1 all-trans-retinal[c] '''+''' 1 NADH[c]
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* Reaction: [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-12195]]
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* Gene: [[Tiso_gene_17086]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-12196]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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*** Assignment: ec-number
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* Gene: [[Tiso_gene_18459]]
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* Reaction: [[RXN0-5462]]
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-7184]]
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* [[PWY-7198]]
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* [[PWY-6545]]
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* [[PWY-7210]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=30124}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21284 21284]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: left end position=11680}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02124 R02124]
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{{#set: centisome position=38.70882    }}
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* UNIPROT:
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{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
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** [http://www.uniprot.org/uniprot/P50169 P50169]
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{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
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** [http://www.uniprot.org/uniprot/Q64437 Q64437]
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** [http://www.uniprot.org/uniprot/P40394 P40394]
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** [http://www.uniprot.org/uniprot/P50170 P50170]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=all-trans-retinol dehydrogenase (NAD)}}
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{{#set: common name=dehydrogenase_reductase_sdr_family_member_on_chromosome_x-like}}
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{{#set: ec number=EC-1.1.1.105}}
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{{#set: common name=all-trans retinol dehydrogenase|retinal reductase}}
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{{#set: gene associated=Tiso_gene_17086|Tiso_gene_18459}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:23, 21 March 2018

Gene Tiso_gene_674

  • right end position:
    • 30124
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 11680
  • centisome position:
    • 38.70882
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_674&oldid=48349"