Difference between revisions of "Tiso gene 10675"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-147 RXN1F-147] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Gene == Gene Tiso_gene_10675 == * right end position: ** 4263 * transcription direction: ** POSITIVE * left end position: ** 738 * centisome position: ** 8.812992...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-147 RXN1F-147] ==
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== Gene Tiso_gene_10675 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 4263
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/5.5.1.18 EC-5.5.1.18]
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** POSITIVE
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* left end position:
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** 738
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* centisome position:
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** 8.812992   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[METHYLCROTONYL-COA-CARBOXYLASE-RXN]]
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** 1 [[CPD1F-114]][c] '''=>''' 1 [[CPD1F-115]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 all-trans-lycopene[c] '''=>''' 1 δ-carotene[c]
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== Pathways associated ==
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* [[LEU-DEG2-PWY]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_11980]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_8263]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_4457]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_6282]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_3577]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_1547]]
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** [[pantograph]]-[[athaliana]]
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== Pathways ==
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* [[PWY-5946]], δ-carotene biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5946 PWY-5946]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: right end position=4263}}
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** [http://www.genome.jp/dbget-bin/www_bget?R06963 R06963]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=738}}
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{{#set: ec number=EC-5.5.1.18}}
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{{#set: centisome position=8.812992    }}
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{{#set: gene associated=Tiso_gene_11980|Tiso_gene_8263|Tiso_gene_4457|Tiso_gene_6282|Tiso_gene_3577|Tiso_gene_1547}}
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{{#set: reaction associated=METHYLCROTONYL-COA-CARBOXYLASE-RXN}}
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{{#set: in pathway=PWY-5946}}
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{{#set: pathway associated=LEU-DEG2-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-athaliana|orthology-creinhardtii|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 20:23, 21 March 2018

Gene Tiso_gene_10675

  • right end position:
    • 4263
  • transcription direction:
    • POSITIVE
  • left end position:
    • 738
  • centisome position:
    • 8.812992
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_10675&oldid=48378"