Difference between revisions of "TRNA-Containing-5AminoMe-2-ThioUrdines"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13615 RXN-13615] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-coenzyme_a_oxidase **...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=tRNA-Containing-5AminoMe-2-ThioUrdines tRNA-Containing-5AminoMe-2-ThioUrdines] == * common name...")
 
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13615 RXN-13615] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=tRNA-Containing-5AminoMe-2-ThioUrdines tRNA-Containing-5AminoMe-2-ThioUrdines] ==
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* direction:
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** LEFT-TO-RIGHT
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* common name:
 
* common name:
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** acyl-coenzyme_a_oxidase
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** a 5-aminomethyl-2-thiouridine in tRNA
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** ORF
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** acyl-CoA_dehydrogenase
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** acyl-_dehydrogenase
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* ec number:
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** [http://enzyme.expasy.org/EC/1.3.8.7 EC-1.3.8.7]
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* Synonym(s):
 
* Synonym(s):
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** a tRNA containing 5-aminomethyl-2-thiouridine
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN0-5144]]
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** 1 [[CPD-10267]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ETF-Oxidized]][c] '''=>''' 1 [[T2-DECENOYL-COA]][c] '''+''' 1 [[ETF-Reduced]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 decanoyl-CoA[c] '''+''' 1 H+[c] '''+''' 1 an oxidized electron-transfer flavoprotein[c] '''=>''' 1 trans-dec-2-enoyl-CoA[c] '''+''' 1 a reduced electron-transfer flavoprotein[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_6475]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_18566]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_883]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_16631]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_5991]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_17967]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-7094]], fatty acid salvage: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7094 PWY-7094]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: common name=a 5-aminomethyl-2-thiouridine in tRNA}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28355 28355]
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{{#set: common name=a tRNA containing 5-aminomethyl-2-thiouridine}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: consumed by=RXN0-5144}}
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{{#set: common name=acyl-coenzyme_a_oxidase}}
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{{#set: common name=ORF}}
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{{#set: common name=acyl-CoA_dehydrogenase}}
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{{#set: common name=acyl-_dehydrogenase}}
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{{#set: ec number=EC-1.3.8.7}}
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{{#set: gene associated=Tiso_gene_6475|Tiso_gene_18566|Tiso_gene_883|Tiso_gene_16631|Tiso_gene_5991|Tiso_gene_17967}}
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{{#set: in pathway=PWY-7094}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:23, 21 March 2018

Metabolite tRNA-Containing-5AminoMe-2-ThioUrdines

  • common name:
    • a 5-aminomethyl-2-thiouridine in tRNA
  • Synonym(s):
    • a tRNA containing 5-aminomethyl-2-thiouridine

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=TRNA-Containing-5AminoMe-2-ThioUrdines&oldid=48394"