Difference between revisions of "Tiso gene 14204"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOACONITATE-HYDRATASE-RXN HOMOACONITATE-HYDRATASE-RXN] == * direction: ** REVERSIBLE * ec number:...")
(Created page with "Category:Gene == Gene Tiso_gene_14204 == * right end position: ** 2821 * transcription direction: ** NEGATIVE * left end position: ** 2457 * centisome position: ** 42.4645...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOACONITATE-HYDRATASE-RXN HOMOACONITATE-HYDRATASE-RXN] ==
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== Gene Tiso_gene_14204 ==
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* direction:
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* right end position:
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** REVERSIBLE
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** 2821
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/4.2.1.36 EC-4.2.1.36]
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** NEGATIVE
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* left end position:
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** 2457
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* centisome position:
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** 42.46457   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN0-4261]]
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** 1 [[HOMO-I-CIT]][c] '''<=>''' 1 [[HOMO-CIS-ACONITATE]][c] '''+''' 1 [[WATER]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 (1R,2S)-homoisocitrate[c] '''<=>''' 1 cis-homoaconitate[c] '''+''' 1 H2O[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_12778]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-3081]], L-lysine biosynthesis V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3081 PWY-3081]
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** '''2''' reactions found over '''10''' reactions in the full pathway
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* [[P241-PWY]], coenzyme B biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=P241-PWY P241-PWY]
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** '''1''' reactions found over '''16''' reactions in the full pathway
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* [[LYSINE-AMINOAD-PWY]], L-lysine biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=LYSINE-AMINOAD-PWY LYSINE-AMINOAD-PWY]
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** '''3''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=2821}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15485 15485]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: left end position=2457}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04371 R04371]
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{{#set: centisome position=42.46457    }}
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* UNIPROT:
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{{#set: reaction associated=RXN0-4261}}
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** [http://www.uniprot.org/uniprot/Q58409 Q58409]
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** [http://www.uniprot.org/uniprot/P49367 P49367]
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** [http://www.uniprot.org/uniprot/Q9UT74 Q9UT74]
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{{#set: direction=REVERSIBLE}}
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{{#set: ec number=EC-4.2.1.36}}
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{{#set: gene associated=Tiso_gene_12778}}
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{{#set: in pathway=PWY-3081|P241-PWY|LYSINE-AMINOAD-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 20:23, 21 March 2018

Gene Tiso_gene_14204

  • right end position:
    • 2821
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 2457
  • centisome position:
    • 42.46457
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_14204&oldid=48398"