Difference between revisions of "RXN-7644"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=tRNA-Containing-5AminoMe-2-ThioUrdines tRNA-Containing-5AminoMe-2-ThioUrdines] == * common name...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7644 RXN-7644] == * direction: ** REVERSIBLE * common name: ** D-sorbitol 2-dehydrogenase ** po...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=tRNA-Containing-5AminoMe-2-ThioUrdines tRNA-Containing-5AminoMe-2-ThioUrdines] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7644 RXN-7644] ==
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* direction:
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** REVERSIBLE
 
* common name:
 
* common name:
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** a 5-aminomethyl-2-thiouridine in tRNA
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** D-sorbitol 2-dehydrogenase
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** polyketide_synthase
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** l-iditol_2-dehydrogenase
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* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.14 EC-1.1.1.14]
 
* Synonym(s):
 
* Synonym(s):
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** a tRNA containing 5-aminomethyl-2-thiouridine
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN0-5144]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[SORBITOL]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[CPD-15382]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 D-sorbitol[c] '''+''' 1 NAD+[c] '''<=>''' 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 keto-D-fructose[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_5424]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_6562]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_18533]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_15088]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_6563]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_5425]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-4101]], D-sorbitol degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4101 PWY-4101]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: common name=a 5-aminomethyl-2-thiouridine in tRNA}}
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* RHEA:
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{{#set: common name=a tRNA containing 5-aminomethyl-2-thiouridine}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33031 33031]
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{{#set: consumed by=RXN0-5144}}
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R00875 R00875]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=D-sorbitol 2-dehydrogenase}}
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{{#set: common name=polyketide_synthase}}
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{{#set: common name=l-iditol_2-dehydrogenase}}
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{{#set: ec number=EC-1.1.1.14}}
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{{#set: gene associated=Tiso_gene_5424|Tiso_gene_6562|Tiso_gene_18533|Tiso_gene_15088|Tiso_gene_6563|Tiso_gene_5425}}
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{{#set: in pathway=PWY-4101}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 21:24, 21 March 2018

Reaction RXN-7644

  • direction:
    • REVERSIBLE
  • common name:
    • D-sorbitol 2-dehydrogenase
    • polyketide_synthase
    • l-iditol_2-dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 D-sorbitol[c] + 1 NAD+[c] <=> 1 H+[c] + 1 NADH[c] + 1 keto-D-fructose[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-4101, D-sorbitol degradation I: PWY-4101
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-7644&oldid=48430"