Difference between revisions of "MANNONDEHYDRAT-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14793 RXN-14793] == * direction: ** LEFT-TO-RIGHT * common name: ** acetyl-_c-acetyltransferase...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MANNONDEHYDRAT-RXN MANNONDEHYDRAT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** mannonate...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14793 RXN-14793] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MANNONDEHYDRAT-RXN MANNONDEHYDRAT-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** acetyl-_c-acetyltransferase
+
** mannonate_dehydratase
−
** 3-ketoacyl-_thiolase
+
−
** thiolase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
+
** [http://enzyme.expasy.org/EC/4.2.1.8 EC-4.2.1.8]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-15678]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[CPD-15663]][c] '''+''' 1 [[ACETYL-COA]][c]
+
** 1 [[D-MANNONATE]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[2-DEHYDRO-3-DEOXY-D-GLUCONATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 4-trans-3-oxo-undecenoyl-CoA[c] '''+''' 1 coenzyme A[c] '''=>''' 1 2-trans-nonenoyl-CoA[c] '''+''' 1 acetyl-CoA[c]
+
** 1 D-mannonate[c] '''=>''' 1 H2O[c] '''+''' 1 2-dehydro-3-deoxy-D-gluconate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_17451]]
+
* Gene: [[Tiso_gene_8331]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
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*** Assignment: EC-NUMBER
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_10116]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_15327]]
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_3856]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_3855]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7339]], 10-trans-heptadecenoyl-CoA degradation (MFE-dependent, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7339 PWY-7339]
+
* [[PWY-7242]], D-fructuronate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7242 PWY-7242]
−
** '''1''' reactions found over '''6''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[experimental_annotation]]
+
*** Tool: [[pathwaytools]]
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20097 20097]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R05606 R05606]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P44488 P44488]
 +
** [http://www.uniprot.org/uniprot/Q9CF50 Q9CF50]
 +
** [http://www.uniprot.org/uniprot/P24215 P24215]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=acetyl-_c-acetyltransferase}}
+
{{#set: common name=mannonate_dehydratase}}
−
{{#set: common name=3-ketoacyl-_thiolase}}
+
{{#set: ec number=EC-4.2.1.8}}
−
{{#set: common name=thiolase}}
+
{{#set: gene associated=Tiso_gene_8331}}
−
{{#set: ec number=EC-2.3.1.16}}
+
{{#set: in pathway=PWY-7242}}
−
{{#set: gene associated=Tiso_gene_17451|Tiso_gene_10116|Tiso_gene_15327|Tiso_gene_3856|Tiso_gene_3855}}
+
−
{{#set: in pathway=PWY-7339}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
 

Latest revision as of 21:24, 21 March 2018

Reaction MANNONDEHYDRAT-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • mannonate_dehydratase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7242, D-fructuronate degradation: PWY-7242
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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