Difference between revisions of "ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_10685 == * left end position: ** 6451 * transcription direction: ** POSITIVE * right end position: ** 8046 * centisome position: ** 77.0360...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN] == * direction:...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN] == |
| − | * | + | * direction: |
| − | + | ** REVERSIBLE | |
| − | + | * common name: | |
| − | ** | + | ** acetylornithine_aminotransferase |
| − | * | + | * ec number: |
| − | ** | + | ** [http://enzyme.expasy.org/EC/2.6.1.44 EC-2.6.1.44] |
| − | * | + | |
| − | ** | + | |
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | ** | + | ** 1 [[GLYOX]][c] '''+''' 1 [[L-ALPHA-ALANINE]][c] '''<=>''' 1 [[GLY]][c] '''+''' 1 [[PYRUVATE]][c] |
| − | *** | + | * With common name(s): |
| − | * [[ | + | ** 1 glyoxylate[c] '''+''' 1 L-alanine[c] '''<=>''' 1 glycine[c] '''+''' 1 pyruvate[c] |
| − | ** in-silico_annotation | + | |
| − | *** | + | == Genes associated with this reaction == |
| − | == Pathways | + | Genes have been associated with this reaction based on different elements listed below. |
| − | * [[PWY- | + | * Gene: [[Tiso_gene_6134]] |
| − | * [[ | + | ** Source: [[orthology-esiliculosus]] |
| − | * [[ | + | * Gene: [[Tiso_gene_5726]] |
| + | ** Source: [[orthology-athaliana]] | ||
| + | * Gene: [[Tiso_gene_11231]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | ** Source: [[annotation-experimental_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | == Pathways == | ||
| + | * [[GLYSYN-ALA-PWY]], glycine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=GLYSYN-ALA-PWY GLYSYN-ALA-PWY] | ||
| + | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-athaliana]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | * Category: [[manual]] | ||
| + | ** Source: [[manual-primary_network]] | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
| + | ** Source: [[annotation-experimental_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | * RHEA: |
| − | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24248 24248] |
| − | {{#set: | + | * LIGAND-RXN: |
| − | {{#set: | + | ** [http://www.genome.jp/dbget-bin/www_bget?R00369 R00369] |
| − | {{#set: | + | * UNIPROT: |
| − | {{#set: | + | ** [http://www.uniprot.org/uniprot/P31029 P31029] |
| + | ** [http://www.uniprot.org/uniprot/P31030 P31030] | ||
| + | ** [http://www.uniprot.org/uniprot/P41689 P41689] | ||
| + | ** [http://www.uniprot.org/uniprot/Q94055 Q94055] | ||
| + | ** [http://www.uniprot.org/uniprot/Q56YA5 Q56YA5] | ||
| + | ** [http://www.uniprot.org/uniprot/P21549 P21549] | ||
| + | {{#set: direction=REVERSIBLE}} | ||
| + | {{#set: common name=acetylornithine_aminotransferase}} | ||
| + | {{#set: ec number=EC-2.6.1.44}} | ||
| + | {{#set: gene associated=Tiso_gene_6134|Tiso_gene_5726|Tiso_gene_11231}} | ||
| + | {{#set: in pathway=GLYSYN-ALA-PWY}} | ||
| + | {{#set: reconstruction category=orthology|manual|annotation}} | ||
| + | {{#set: reconstruction source=annotation-in-silico_annotation|orthology-athaliana|annotation-experimental_annotation|manual-primary_network|orthology-esiliculosus}} | ||
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 20:24, 21 March 2018
Contents
Reaction ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN
- direction:
- REVERSIBLE
- common name:
- acetylornithine_aminotransferase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 GLYOX[c] + 1 L-ALPHA-ALANINE[c] <=> 1 GLY[c] + 1 PYRUVATE[c]
- With common name(s):
- 1 glyoxylate[c] + 1 L-alanine[c] <=> 1 glycine[c] + 1 pyruvate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_6134
- Source: orthology-esiliculosus
- Gene: Tiso_gene_5726
- Source: orthology-athaliana
- Gene: Tiso_gene_11231
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-experimental_annotation
- Assignment: EC-NUMBER
- Source: orthology-esiliculosus
- Source: annotation-in-silico_annotation
Pathways
- GLYSYN-ALA-PWY, glycine biosynthesis III: GLYSYN-ALA-PWY
- 1 reactions found over 1 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-athaliana
- Tool: pantograph
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-athaliana
- Category: manual
- Source: manual-primary_network
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
