Difference between revisions of "Tiso gene 14474"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UREASE-RXN UREASE-RXN] == * direction: ** REVERSIBLE * common name: ** urease ** urease_accessory_p...")
 
(Created page with "Category:Gene == Gene Tiso_gene_14474 == * right end position: ** 1585 * transcription direction: ** POSITIVE * left end position: ** 261 * centisome position: ** 4.636702...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UREASE-RXN UREASE-RXN] ==
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== Gene Tiso_gene_14474 ==
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* direction:
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* right end position:
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** REVERSIBLE
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** 1585
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* common name:
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* transcription direction:
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** urease
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** POSITIVE
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** urease_accessory_protein
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* left end position:
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* ec number:
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** 261
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** [http://enzyme.expasy.org/EC/3.5.1.5 EC-3.5.1.5]
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* centisome position:
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** 4.6367025   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ATCY]]
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** 2 [[PROTON]][c] '''+''' 1 [[UREA]][c] '''+''' 1 [[WATER]][c] '''<=>''' 2 [[AMMONIUM]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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** Source: [[orthology-creinhardtii]]
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* With common name(s):
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* Reaction: [[ATPASE-RXN]]
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** 2 H+[c] '''+''' 1 urea[c] '''+''' 1 H2O[c] '''<=>''' 2 ammonium[c] '''+''' 1 CO2[c]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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== Genes associated with this reaction  ==
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* Reaction: [[AUPT]]
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[orthology-creinhardtii]]
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* [[Tiso_gene_3909]]
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* Reaction: [[DATCY]]
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** IN-SILICO_ANNOTATION
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** Source: [[orthology-creinhardtii]]
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***EC-NUMBER
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* Reaction: [[DATUP]]
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** EXPERIMENTAL_ANNOTATION
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** Source: [[orthology-creinhardtii]]
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***EC-NUMBER
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* Reaction: [[DCTCP]]
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* [[Tiso_gene_794]]
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** Source: [[orthology-creinhardtii]]
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** IN-SILICO_ANNOTATION
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* Reaction: [[DCTUP]]
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***EC-NUMBER
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** Source: [[orthology-creinhardtii]]
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** EXPERIMENTAL_ANNOTATION
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* Reaction: [[DGTCY]]
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***EC-NUMBER
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** Source: [[orthology-creinhardtii]]
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== Pathways  ==
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* Reaction: [[DGTUP]]
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* [[PWY-5704]], urea degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5704 PWY-5704]
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** Source: [[orthology-creinhardtii]]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* Reaction: [[DTTGY]]
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== Reconstruction information  ==
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** Source: [[orthology-creinhardtii]]
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* [[annotation]]:
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* Reaction: [[DTTUP]]
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** [[pathwaytools]]:
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** Source: [[orthology-creinhardtii]]
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*** [[experimental_annotation]]
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* Reaction: [[DUTCP]]
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*** [[in-silico_annotation]]
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** Source: [[orthology-creinhardtii]]
 +
* Reaction: [[DUTUP]]
 +
** Source: [[orthology-creinhardtii]]
 +
* Reaction: [[GTCY]]
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** Source: [[orthology-creinhardtii]]
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* Reaction: [[GTUP]]
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** Source: [[orthology-creinhardtii]]
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* Reaction: [[ITCY]]
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** Source: [[orthology-creinhardtii]]
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* Reaction: [[ITUP]]
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** Source: [[orthology-creinhardtii]]
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* Reaction: [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-12195]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-12196]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN0-5462]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[URIDINEKIN-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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* Reaction: [[URKI-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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* Reaction: [[UTCY]]
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** Source: [[orthology-creinhardtii]]
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* Reaction: [[UTUP]]
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** Source: [[orthology-creinhardtii]]
 +
== Pathways associated ==
 +
* [[PWY-7184]]
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* [[PWY-7198]]
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* [[PWY-6545]]
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* [[PWY-7193]]
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* [[PWY-7210]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: right end position=1585}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00131 R00131]
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{{#set: transcription direction=POSITIVE}}
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* UNIPROT:
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{{#set: left end position=261}}
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** [http://www.uniprot.org/uniprot/P17337 P17337]
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{{#set: centisome position=4.6367025    }}
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** [http://www.uniprot.org/uniprot/P18316 P18316]
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{{#set: reaction associated=ATCY|ATPASE-RXN|AUPT|DATCY|DATUP|DCTCP|DCTUP|DGTCY|DGTUP|DTTGY|DTTUP|DUTCP|DUTUP|GTCY|GTUP|ITCY|ITUP|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462|URIDINEKIN-RXN|URKI-RXN|UTCY|UTUP}}
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** [http://www.uniprot.org/uniprot/Q07399 Q07399]
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{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7193|PWY-7210}}
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** [http://www.uniprot.org/uniprot/P44393 P44393]
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** [http://www.uniprot.org/uniprot/P17338 P17338]
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** [http://www.uniprot.org/uniprot/Q07398 Q07398]
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** [http://www.uniprot.org/uniprot/P17088 P17088]
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** [http://www.uniprot.org/uniprot/Q03282 Q03282]
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** [http://www.uniprot.org/uniprot/Q9R5F8 Q9R5F8]
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** [http://www.uniprot.org/uniprot/P17339 P17339]
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** [http://www.uniprot.org/uniprot/Q07397 Q07397]
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** [http://www.uniprot.org/uniprot/P17087 P17087]
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** [http://www.uniprot.org/uniprot/Q08716 Q08716]
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** [http://www.uniprot.org/uniprot/P17086 P17086]
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** [http://www.uniprot.org/uniprot/Q9R2X6 Q9R2X6]
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** [http://www.uniprot.org/uniprot/Q9R5F6 Q9R5F6]
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** [http://www.uniprot.org/uniprot/Q9R5F5 Q9R5F5]
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** [http://www.uniprot.org/uniprot/Q9R5F4 Q9R5F4]
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** [http://www.uniprot.org/uniprot/P44391 P44391]
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** [http://www.uniprot.org/uniprot/P44392 P44392]
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** [http://www.uniprot.org/uniprot/P16124 P16124]
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** [http://www.uniprot.org/uniprot/P16123 P16123]
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** [http://www.uniprot.org/uniprot/P16122 P16122]
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** [http://www.uniprot.org/uniprot/P17274 P17274]
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** [http://www.uniprot.org/uniprot/P17273 P17273]
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** [http://www.uniprot.org/uniprot/P17272 P17272]
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** [http://www.uniprot.org/uniprot/P31496 P31496]
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** [http://www.uniprot.org/uniprot/Q08715 Q08715]
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** [http://www.uniprot.org/uniprot/P31494 P31494]
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** [http://www.uniprot.org/uniprot/P42875 P42875]
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** [http://www.uniprot.org/uniprot/P42874 P42874]
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** [http://www.uniprot.org/uniprot/P42873 P42873]
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** [http://www.uniprot.org/uniprot/Q9R5X1 Q9R5X1]
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** [http://www.uniprot.org/uniprot/Q41214 Q41214]
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** [http://www.uniprot.org/uniprot/P42887 P42887]
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** [http://www.uniprot.org/uniprot/P42886 P42886]
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** [http://www.uniprot.org/uniprot/P42885 P42885]
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** [http://www.uniprot.org/uniprot/P41022 P41022]
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** [http://www.uniprot.org/uniprot/P41021 P41021]
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** [http://www.uniprot.org/uniprot/P41020 P41020]
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** [http://www.uniprot.org/uniprot/P73796 P73796]
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** [http://www.uniprot.org/uniprot/P73061 P73061]
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** [http://www.uniprot.org/uniprot/P08298 P08298]
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** [http://www.uniprot.org/uniprot/O86508 O86508]
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** [http://www.uniprot.org/uniprot/O00084 O00084]
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** [http://www.uniprot.org/uniprot/Q9RFF5 Q9RFF5]
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** [http://www.uniprot.org/uniprot/Q9RFF4 Q9RFF4]
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−
** [http://www.uniprot.org/uniprot/Q9RFF2 Q9RFF2]
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** [http://www.uniprot.org/uniprot/P07374 P07374]
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** [http://www.uniprot.org/uniprot/P14916 P14916]
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** [http://www.uniprot.org/uniprot/P69996 P69996]
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** [http://www.uniprot.org/uniprot/P69997 P69997]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=urease}}
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{{#set: common name=urease_accessory_protein}}
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{{#set: ec number=EC-3.5.1.5}}
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{{#set: gene associated=Tiso_gene_3909|Tiso_gene_794}}
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−
{{#set: in pathway=PWY-5704}}
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−
{{#set: reconstruction category=annotation}}
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−
{{#set: reconstruction tool=pathwaytools}}
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−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 20:24, 21 March 2018

Gene Tiso_gene_14474

  • right end position:
    • 1585
  • transcription direction:
    • POSITIVE
  • left end position:
    • 261
  • centisome position:
    • 4.6367025
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_14474&oldid=48494"