Difference between revisions of "3.1.3.46-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ISOLEUCINE--TRNA-LIGASE-RXN ISOLEUCINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.3.46-RXN 3.1.3.46-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ISOLEUCINE--TRNA-LIGASE-RXN ISOLEUCINE--TRNA-LIGASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.3.46-RXN 3.1.3.46-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** isoleucine--trna_cytoplasmic
 
−
** isoleucine--trna_ligase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.1.1.5 EC-6.1.1.5]
+
** [http://enzyme.expasy.org/EC/3.1.3.46 EC-3.1.3.46]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[ILE]][c] '''+''' 1 [[ILE-tRNAs]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[Charged-ILE-tRNAs]][c]
+
** 1 [[CPD-535]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[FRUCTOSE-6P]][c] '''+''' 1 [[Pi]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 L-isoleucine[c] '''+''' 1 a tRNAile[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 an L-isoleucyl-[tRNAile][c]
+
** 1 β-D-fructose 2,6-bisphosphate[c] '''+''' 1 H2O[c] '''=>''' 1 β-D-fructofuranose 6-phosphate[c] '''+''' 1 phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_12496]]
+
* Gene: [[Tiso_gene_15398]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-experimental_annotation]]
−
***EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** EXPERIMENTAL_ANNOTATION
+
** Source: [[orthology-creinhardtii]]
−
***EC-NUMBER
+
* Gene: [[Tiso_gene_892]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[annotation-experimental_annotation]]
−
* [[Tiso_gene_11779]]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** IN-SILICO_ANNOTATION
+
* Gene: [[Tiso_gene_893]]
−
***EC-NUMBER
+
** Source: [[orthology-athaliana]]
−
** EXPERIMENTAL_ANNOTATION
+
* Gene: [[Tiso_gene_2100]]
−
***EC-NUMBER
+
** Source: [[annotation-experimental_annotation]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** Assignment: AUTOMATED-NAME-MATCH
 +
** Source: [[orthology-athaliana]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
+
* [[PWY66-423]], fructose 2,6-bisphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-423 PWY66-423]
−
** '''21''' reactions found over '''21''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-athaliana]]
−
*** [[esiliculosus]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
** Source: [[orthology-creinhardtii]]
−
** [[pathwaytools]]:
+
*** Tool: [[pantograph]]
−
*** [[experimental_annotation]]
+
* Category: [[annotation]]
−
*** [[in-silico_annotation]]
+
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11060 11060]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17289 17289]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03656 R03656]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00763 R00763]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P18330 P18330]
+
** [http://www.uniprot.org/uniprot/P26285 P26285]
−
** [http://www.uniprot.org/uniprot/P36422 P36422]
+
** [http://www.uniprot.org/uniprot/P25114 P25114]
−
** [http://www.uniprot.org/uniprot/O29622 O29622]
+
** [http://www.uniprot.org/uniprot/Q7M3I3 Q7M3I3]
−
** [http://www.uniprot.org/uniprot/P47587 P47587]
+
** [http://www.uniprot.org/uniprot/P49872 P49872]
−
** [http://www.uniprot.org/uniprot/Q9ZCU4 Q9ZCU4]
+
** [http://www.uniprot.org/uniprot/Q28830 Q28830]
−
** [http://www.uniprot.org/uniprot/P46213 P46213]
+
** [http://www.uniprot.org/uniprot/Q91348 Q91348]
−
** [http://www.uniprot.org/uniprot/P41257 P41257]
+
** [http://www.uniprot.org/uniprot/Q9JJH5 Q9JJH5]
−
** [http://www.uniprot.org/uniprot/Q9JVY4 Q9JVY4]
+
** [http://www.uniprot.org/uniprot/Q16875 Q16875]
−
** [http://www.uniprot.org/uniprot/Q58357 Q58357]
+
** [http://www.uniprot.org/uniprot/P07953 P07953]
−
** [http://www.uniprot.org/uniprot/O83466 O83466]
+
** [http://www.uniprot.org/uniprot/P16118 P16118]
−
** [http://www.uniprot.org/uniprot/Q9Z972 Q9Z972]
+
** [http://www.uniprot.org/uniprot/P32604 P32604]
−
** [http://www.uniprot.org/uniprot/P56456 P56456]
+
** [http://www.uniprot.org/uniprot/P70265 P70265]
−
** [http://www.uniprot.org/uniprot/O58792 O58792]
+
** [http://www.uniprot.org/uniprot/P70266 P70266]
−
** [http://www.uniprot.org/uniprot/O84022 O84022]
+
** [http://www.uniprot.org/uniprot/O24559 O24559]
−
** [http://www.uniprot.org/uniprot/Q9ZJJ1 Q9ZJJ1]
+
** [http://www.uniprot.org/uniprot/O81398 O81398]
−
** [http://www.uniprot.org/uniprot/O66651 O66651]
+
** [http://www.uniprot.org/uniprot/O64983 O64983]
−
** [http://www.uniprot.org/uniprot/Q9CEH8 Q9CEH8]
+
** [http://www.uniprot.org/uniprot/Q9URZ7 Q9URZ7]
−
** [http://www.uniprot.org/uniprot/O27428 O27428]
+
−
** [http://www.uniprot.org/uniprot/Q45477 Q45477]
+
−
** [http://www.uniprot.org/uniprot/O51773 O51773]
+
−
** [http://www.uniprot.org/uniprot/P46207 P46207]
+
−
** [http://www.uniprot.org/uniprot/P41252 P41252]
+
−
** [http://www.uniprot.org/uniprot/P41972 P41972]
+
−
** [http://www.uniprot.org/uniprot/P48526 P48526]
+
−
** [http://www.uniprot.org/uniprot/P75258 P75258]
+
−
** [http://www.uniprot.org/uniprot/P73505 P73505]
+
−
** [http://www.uniprot.org/uniprot/Q49024 Q49024]
+
−
** [http://www.uniprot.org/uniprot/Q49074 Q49074]
+
−
** [http://www.uniprot.org/uniprot/P43824 P43824]
+
−
** [http://www.uniprot.org/uniprot/P09436 P09436]
+
−
** [http://www.uniprot.org/uniprot/P00956 P00956]
+
−
** [http://www.uniprot.org/uniprot/Q94425 Q94425]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=isoleucine--trna_cytoplasmic}}
+
{{#set: ec number=EC-3.1.3.46}}
−
{{#set: common name=isoleucine--trna_ligase}}
+
{{#set: gene associated=Tiso_gene_15398|Tiso_gene_892|Tiso_gene_893|Tiso_gene_2100}}
−
{{#set: ec number=EC-6.1.1.5}}
+
{{#set: in pathway=PWY66-423}}
−
{{#set: gene associated=Tiso_gene_12496|Tiso_gene_11779}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: in pathway=TRNA-CHARGING-PWY}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-athaliana|orthology-creinhardtii|annotation-experimental_annotation}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Latest revision as of 20:24, 21 March 2018

Reaction 3.1.3.46-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 β-D-fructose 2,6-bisphosphate[c] + 1 H2O[c] => 1 β-D-fructofuranose 6-phosphate[c] + 1 phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY66-423, fructose 2,6-bisphosphate biosynthesis: PWY66-423
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links




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