Difference between revisions of "STRICTOSIDINE-SYNTHASE-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_18936 == * left end position: ** 124 * transcription direction: ** POSITIVE * right end position: ** 1634 * centisome position: ** 4.590892...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=STRICTOSIDINE-SYNTHASE-RXN STRICTOSIDINE-SYNTHASE-RXN] == * direction: ** LEFT-TO-RIGHT * common na...")
 
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_18936 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=STRICTOSIDINE-SYNTHASE-RXN STRICTOSIDINE-SYNTHASE-RXN] ==
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* left end position:
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* direction:
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** 124
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** strictosidine_synthase
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* right end position:
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* ec number:
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** 1634
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** [http://enzyme.expasy.org/EC/4.3.3.2 EC-4.3.3.2]
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* centisome position:
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** 4.5908923   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[SECOLOGANIN-CPD]][c] '''+''' 1 [[TRYPTAMINE]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[STRICTOSIDINE]][c]
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***ec-number
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* With common name(s):
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** [[pantograph]]-[[esiliculosus]]
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** 1 secologanin[c] '''+''' 1 tryptamine[c] '''=>''' 1 H2O[c] '''+''' 1 strictosidine[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_8474]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-athaliana]]
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* Gene: [[Tiso_gene_8473]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-5290]], secologanin and strictosidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5290 PWY-5290]
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** '''1''' reactions found over '''13''' reactions in the full pathway
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* [[PWY-6326]], camptothecin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6326 PWY-6326]
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** '''1''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=124}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15013 15013]
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{{#set: right end position=1634}}
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* LIGAND-RXN:
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{{#set: centisome position=4.5908923    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R03738 R03738]
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{{#set: reaction associated=TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN}}
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/Q9VAQ9 Q9VAQ9]
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** [http://www.uniprot.org/uniprot/P68175 P68175]
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** [http://www.uniprot.org/uniprot/P18417 P18417]
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** [http://www.uniprot.org/uniprot/P68174 P68174]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=strictosidine_synthase}}
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{{#set: ec number=EC-4.3.3.2}}
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{{#set: gene associated=Tiso_gene_8474|Tiso_gene_8473}}
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{{#set: in pathway=PWY-5290|PWY-6326}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 21:24, 21 March 2018

Reaction STRICTOSIDINE-SYNTHASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • strictosidine_synthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5290, secologanin and strictosidine biosynthesis: PWY-5290
    • 1 reactions found over 13 reactions in the full pathway
  • PWY-6326, camptothecin biosynthesis: PWY-6326
    • 1 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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