Difference between revisions of "Tiso gene 5666"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-445 RXN1G-445] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxoacyl-synthase * ec num...")
 
(Created page with "Category:Gene == Gene Tiso_gene_5666 == * right end position: ** 4339 * transcription direction: ** NEGATIVE * left end position: ** 887 * centisome position: ** 6.780827...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-445 RXN1G-445] ==
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== Gene Tiso_gene_5666 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 4339
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* common name:
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* transcription direction:
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** 3-oxoacyl-synthase
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** NEGATIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
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** 887
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* centisome position:
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** 6.780827   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN-13185]]
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** 1 [[MALONYL-COA]][c] '''+''' 1 [[Arachidoyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[3-oxo-behenoyl-ACPs]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 malonyl-CoA[c] '''+''' 1 an arachidoyl-[acp][c] '''+''' 1 H+[c] '''=>''' 1 coenzyme A[c] '''+''' 1 CO2[c] '''+''' 1 a 3-oxo-behenoyl-[acp][c]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-7984]]
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== Genes associated with this reaction  ==
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** Source: [[annotation-in-silico_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** Assignment: ec-number
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* [[Tiso_gene_5939]]
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** Source: [[orthology-esiliculosus]]
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** IN-SILICO_ANNOTATION
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* Reaction: [[RXN-7985]]
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***EC-NUMBER
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** Source: [[annotation-in-silico_annotation]]
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** EXPERIMENTAL_ANNOTATION
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*** Assignment: ec-number
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***EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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* [[Tiso_gene_19302]]
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== Pathways associated ==
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** [[pantograph]]-[[esiliculosus]]
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* [[PWY-5945]]
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* [[Tiso_gene_14485]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_15991]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWYG-321]], mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYG-321 PWYG-321]
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** '''86''' reactions found over '''182''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=4339}}
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{{#set: common name=3-oxoacyl-synthase}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: ec number=EC-2.3.1.41}}
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{{#set: left end position=887}}
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{{#set: gene associated=Tiso_gene_5939|Tiso_gene_19302|Tiso_gene_14485|Tiso_gene_15991}}
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{{#set: centisome position=6.780827    }}
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{{#set: in pathway=PWYG-321}}
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{{#set: reaction associated=RXN-13185|RXN-7984|RXN-7985}}
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{{#set: reconstruction category=orthology}}
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{{#set: pathway associated=PWY-5945}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 20:24, 21 March 2018

Gene Tiso_gene_5666

  • right end position:
    • 4339
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 887
  • centisome position:
    • 6.780827
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_5666&oldid=48548"