Difference between revisions of "UDP-ARABINOSE-4-EPIMERASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHORIBULOKINASE-RXN PHOSPHORIBULOKINASE-RXN] == * direction: ** REVERSIBLE * common name: ** ph...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDP-ARABINOSE-4-EPIMERASE-RXN UDP-ARABINOSE-4-EPIMERASE-RXN] == * direction: ** REVERSIBLE * common...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHORIBULOKINASE-RXN PHOSPHORIBULOKINASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDP-ARABINOSE-4-EPIMERASE-RXN UDP-ARABINOSE-4-EPIMERASE-RXN] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 
* common name:
 
* common name:
−
** phosphoribulokinase
+
** udp-galactopyranose_mutase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.1.19 EC-2.7.1.19]
+
** [http://enzyme.expasy.org/EC/5.1.3.5 EC-5.1.3.5]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[RIBULOSE-5P]][c] '''<=>''' 1 [[D-RIBULOSE-15-P2]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c]
+
** 1 [[CPD-12513]][c] '''<=>''' 1 [[UDP-D-XYLOSE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 D-ribulose 5-phosphate[c] '''<=>''' 1 D-ribulose-1,5-bisphosphate[c] '''+''' 1 H+[c] '''+''' 1 ADP[c]
+
** 1 UDP-&beta;-L-arabinopyranose[c] '''<=>''' 1 UDP-&alpha;-D-xylose[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_17637]]
+
* Gene: [[Tiso_gene_15395]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
** EXPERIMENTAL_ANNOTATION
+
** Source: [[annotation-experimental_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[synechocystis]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[CALVIN-PWY]], Calvin-Benson-Bassham cycle: [http://metacyc.org/META/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY]
+
* [[PWY-63]], UDP-L-arabinose biosynthesis I (from UDP-xylose): [http://metacyc.org/META/NEW-IMAGE?object=PWY-63 PWY-63]
−
** '''13''' reactions found over '''13''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-5723]], Rubisco shunt: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5723 PWY-5723]
+
−
** '''10''' reactions found over '''10''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-experimental_annotation]]
−
*** [[creinhardtii]]
+
*** Tool: [[pathwaytools]]
−
*** [[synechocystis]]
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[athaliana]]
+
*** Tool: [[pathwaytools]]
−
*** [[esiliculosus]]
+
−
* [[manual]]:
+
−
** [[primary_network]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19365 19365]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11320 11320]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01523 R01523]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01473 R01473]
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/P23010 P23010]
+
−
** [http://www.uniprot.org/uniprot/P0AEX5 P0AEX5]
+
−
** [http://www.uniprot.org/uniprot/P19923 P19923]
+
−
** [http://www.uniprot.org/uniprot/P19924 P19924]
+
−
** [http://www.uniprot.org/uniprot/P23015 P23015]
+
−
** [http://www.uniprot.org/uniprot/P12033 P12033]
+
−
** [http://www.uniprot.org/uniprot/Q8GRU9 Q8GRU9]
+
−
** [http://www.uniprot.org/uniprot/P09559 P09559]
+
−
** [http://www.uniprot.org/uniprot/P25697 P25697]
+
−
** [http://www.uniprot.org/uniprot/P93681 P93681]
+
−
** [http://www.uniprot.org/uniprot/P19824 P19824]
+
−
** [http://www.uniprot.org/uniprot/P27774 P27774]
+
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=phosphoribulokinase}}
+
{{#set: common name=udp-galactopyranose_mutase}}
−
{{#set: ec number=EC-2.7.1.19}}
+
{{#set: ec number=EC-5.1.3.5}}
−
{{#set: gene associated=Tiso_gene_17637}}
+
{{#set: gene associated=Tiso_gene_15395}}
−
{{#set: in pathway=CALVIN-PWY|PWY-5723}}
+
{{#set: in pathway=PWY-63}}
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=creinhardtii|synechocystis|athaliana|esiliculosus}}
+
−
{{#set: reconstruction category=manual}}
+
−
{{#set: reconstruction source=primary_network}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
 

Latest revision as of 21:25, 21 March 2018

Reaction UDP-ARABINOSE-4-EPIMERASE-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • udp-galactopyranose_mutase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 UDP-β-L-arabinopyranose[c] <=> 1 UDP-α-D-xylose[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-63, UDP-L-arabinose biosynthesis I (from UDP-xylose): PWY-63
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links





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