Difference between revisions of "Initiation-tRNAmet"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=STRICTOSIDINE-SYNTHASE-RXN STRICTOSIDINE-SYNTHASE-RXN] == * direction: ** LEFT-TO-RIGHT * common na...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Initiation-tRNAmet Initiation-tRNAmet] == * common name: ** initiator tRNAmet * Synonym(s): **...")
 
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[[Category:Reaction]]
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[[Category:Metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=STRICTOSIDINE-SYNTHASE-RXN STRICTOSIDINE-SYNTHASE-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Initiation-tRNAmet Initiation-tRNAmet] ==
* direction:
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** LEFT-TO-RIGHT
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* common name:
 
* common name:
** strictosidine_synthase
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** initiator tRNAmet
* ec number:
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** [http://enzyme.expasy.org/EC/4.3.3.2 EC-4.3.3.2]
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* Synonym(s):
 
* Synonym(s):
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** tRNAfmet
  
== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
* With identifiers:
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* [[RXN-16165]]
** 1 [[TRYPTAMINE]][c] '''+''' 1 [[SECOLOGANIN-CPD]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[STRICTOSIDINE]][c]
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== Reaction(s) known to produce the compound ==
* With common name(s):
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== Reaction(s) of unknown directionality ==
** 1 tryptamine[c] '''+''' 1 secologanin[c] '''=>''' 1 H2O[c] '''+''' 1 strictosidine[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_8474]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_8473]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-5290]], secologanin and strictosidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5290 PWY-5290]
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** '''1''' reactions found over '''13''' reactions in the full pathway
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* [[PWY-6326]], camptothecin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6326 PWY-6326]
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** '''1''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
* RHEA:
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{{#set: common name=initiator tRNAmet}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15013 15013]
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{{#set: common name=tRNAfmet}}
* LIGAND-RXN:
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{{#set: consumed by=RXN-16165}}
** [http://www.genome.jp/dbget-bin/www_bget?R03738 R03738]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/Q9VAQ9 Q9VAQ9]
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** [http://www.uniprot.org/uniprot/P68175 P68175]
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** [http://www.uniprot.org/uniprot/P18417 P18417]
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** [http://www.uniprot.org/uniprot/P68174 P68174]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=strictosidine_synthase}}
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{{#set: ec number=EC-4.3.3.2}}
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{{#set: gene associated=Tiso_gene_8474|Tiso_gene_8473}}
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{{#set: in pathway=PWY-5290|PWY-6326}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:25, 21 March 2018

Metabolite Initiation-tRNAmet

  • common name:
    • initiator tRNAmet
  • Synonym(s):
    • tRNAfmet

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links