Difference between revisions of "RXN-17782"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SHIKIMATE-5-DEHYDROGENASE-RXN SHIKIMATE-5-DEHYDROGENASE-RXN] == * direction: ** LEFT-TO-RIGHT * com...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17782 RXN-17782] == * direction: ** LEFT-TO-RIGHT * common name: ** acetyl-_c-acetyltransferase...")
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SHIKIMATE-5-DEHYDROGENASE-RXN SHIKIMATE-5-DEHYDROGENASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17782 RXN-17782] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** pentafunctional_protein
+
** acetyl-_c-acetyltransferase
 +
** thiolase
 +
** 3-ketoacyl-_thiolase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1.25 EC-1.1.1.25]
+
** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[3-DEHYDRO-SHIKIMATE]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[SHIKIMATE]][c] '''+''' 1 [[NADP]][c]
+
** 1 [[CPD-19167]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[CPD-15436]][c] '''+''' 1 [[ACETYL-COA]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 3-dehydroshikimate[c] '''+''' 1 NADPH[c] '''+''' 1 H+[c] '''=>''' 1 shikimate[c] '''+''' 1 NADP+[c]
+
** 1 3-oxo-(7Z)-hexadecenoyl-CoA[c] '''+''' 1 coenzyme A[c] '''=>''' 1 (5Z)-tetradecenoyl-CoA[c] '''+''' 1 acetyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_5753]]
+
* Gene: [[Tiso_gene_3856]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[esiliculosus]]
+
* Gene: [[Tiso_gene_17451]]
−
* [[Tiso_gene_5752]]
+
** Source: [[annotation-in-silico_annotation]]
−
** IN-SILICO_ANNOTATION
+
*** Assignment: EC-NUMBER
−
***EC-NUMBER
+
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_10116]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_3855]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_15327]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6163]], chorismate biosynthesis from 3-dehydroquinate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6163 PWY-6163]
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[esiliculosus]]
+
*** Tool: [[pathwaytools]]
−
* [[manual]]:
+
** Source: [[annotation-experimental_annotation]]
−
** [[primary_network]]
+
*** Tool: [[pathwaytools]]
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17737 17737]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R02413 R02413]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P07547 P07547]
 
−
** [http://www.uniprot.org/uniprot/P08566 P08566]
 
−
** [http://www.uniprot.org/uniprot/Q58484 Q58484]
 
−
** [http://www.uniprot.org/uniprot/Q9PIA0 Q9PIA0]
 
−
** [http://www.uniprot.org/uniprot/P0A6D5 P0A6D5]
 
−
** [http://www.uniprot.org/uniprot/Q9CES7 Q9CES7]
 
−
** [http://www.uniprot.org/uniprot/Q44606 Q44606]
 
−
** [http://www.uniprot.org/uniprot/Q44608 Q44608]
 
−
** [http://www.uniprot.org/uniprot/Q44609 Q44609]
 
−
** [http://www.uniprot.org/uniprot/Q44610 Q44610]
 
−
** [http://www.uniprot.org/uniprot/Q44611 Q44611]
 
−
** [http://www.uniprot.org/uniprot/Q44612 Q44612]
 
−
** [http://www.uniprot.org/uniprot/P15770 P15770]
 
−
** [http://www.uniprot.org/uniprot/Q42947 Q42947]
 
−
** [http://www.uniprot.org/uniprot/O65917 O65917]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=pentafunctional_protein}}
+
{{#set: common name=acetyl-_c-acetyltransferase}}
−
{{#set: ec number=EC-1.1.1.25}}
+
{{#set: common name=thiolase}}
−
{{#set: gene associated=Tiso_gene_5753|Tiso_gene_5752}}
+
{{#set: common name=3-ketoacyl-_thiolase}}
−
{{#set: in pathway=PWY-6163}}
+
{{#set: ec number=EC-2.3.1.16}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: gene associated=Tiso_gene_3856|Tiso_gene_17451|Tiso_gene_10116|Tiso_gene_3855|Tiso_gene_15327}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: in pathway=}}
−
{{#set: reconstruction source=esiliculosus}}
+
−
{{#set: reconstruction category=manual}}
+
−
{{#set: reconstruction source=primary_network}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=in-silico_annotation}}
 

Latest revision as of 20:26, 21 March 2018

Reaction RXN-17782

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • acetyl-_c-acetyltransferase
    • thiolase
    • 3-ketoacyl-_thiolase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 3-oxo-(7Z)-hexadecenoyl-CoA[c] + 1 coenzyme A[c] => 1 (5Z)-tetradecenoyl-CoA[c] + 1 acetyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-17782&oldid=48703"