Difference between revisions of "Manual-export biomass rxn"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17782 RXN-17782] == * direction: ** LEFT-TO-RIGHT * common name: ** acetyl-_c-acetyltransferase...")
(Created page with "{{#ask: Category:Reaction reconstruction source::manual-export_biomass_rxn | ?COMMON NAME | ?ec number | ?reconstruction category | ?reconstruction tool | ?reconstruct...")
 
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[[Category:Reaction]]
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{{#ask: [[Category:Reaction]] [[reconstruction source::manual-export_biomass_rxn]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17782 RXN-17782] ==
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| ?COMMON NAME
* direction:
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| ?ec number
** LEFT-TO-RIGHT
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| ?reconstruction category
* common name:
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| ?reconstruction tool
** acetyl-_c-acetyltransferase
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| ?reconstruction source
** thiolase
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| ?reconstruction comment
** 3-ketoacyl-_thiolase
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| ?gene associated
* ec number:
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| ?in pathway
** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
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}}
* Synonym(s):
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== Reaction Formula ==
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* With identifiers:
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** 1 [[CPD-19167]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[CPD-15436]][c] '''+''' 1 [[ACETYL-COA]][c]
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* With common name(s):
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** 1 3-oxo-(7Z)-hexadecenoyl-CoA[c] '''+''' 1 coenzyme A[c] '''=>''' 1 (5Z)-tetradecenoyl-CoA[c] '''+''' 1 acetyl-CoA[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_3855]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_3856]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_17451]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_10116]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_15327]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=acetyl-_c-acetyltransferase}}
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{{#set: common name=thiolase}}
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{{#set: common name=3-ketoacyl-_thiolase}}
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{{#set: ec number=EC-2.3.1.16}}
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{{#set: gene associated=Tiso_gene_3855|Tiso_gene_3856|Tiso_gene_17451|Tiso_gene_10116|Tiso_gene_15327}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:26, 21 March 2018

 COMMON NAMEEc numberReconstruction categoryReconstruction toolReconstruction sourceReconstruction commentGene associatedIn pathway
ExchangeDeadEnd Biomass-CompositionsManualManual-export biomass rxnReaction added to avoid biomass-compositions accumulation