Difference between revisions of "Tiso gene 8153"

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(Created page with "Category:Gene == Gene Tiso_gene_348 == * left end position: ** 30916 * transcription direction: ** POSITIVE * right end position: ** 34578 * centisome position: ** 87.8994...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRANS-RXN0-623 TRANS-RXN0-623] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_syntha...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_348 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRANS-RXN0-623 TRANS-RXN0-623] ==
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* left end position:
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* direction:
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** 30916
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** polyketide_synthase
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* right end position:
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** long_chain_acyl-_synthetase
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** 34578
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** ORF
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* centisome position:
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** acyl-_synthetase
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** 87.89947   
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* ec number:
 +
** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[ACYLCOASYN-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[CO-A]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[CPD66-39]][e] '''+''' 1 [[PROTON]][e] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Saturated-Fatty-Acyl-CoA]][c] '''+''' 1 [[PPI]][c]
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***ec-number
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* With common name(s):
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** experimental_annotation
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** 1 coenzyme A[c] '''+''' 1 ATP[c] '''+''' 1 a 2,3,4-saturated fatty acid[e] '''+''' 1 H+[e] '''=>''' 1 AMP[c] '''+''' 1 H+[c] '''+''' 1 a 2,3,4-saturated fatty acyl CoA[c] '''+''' 1 diphosphate[c]
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***ec-number
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* [[LINOLENOYL-RXN]]
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== Genes associated with this reaction  ==
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** in-silico_annotation
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Genes have been associated with this reaction based on different elements listed below.
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***ec-number
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* [[Tiso_gene_348]]
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** experimental_annotation
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** IN-SILICO_ANNOTATION
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***ec-number
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***EC-NUMBER
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* [[R223-RXN]]
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** EXPERIMENTAL_ANNOTATION
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** in-silico_annotation
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***EC-NUMBER
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***ec-number
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* [[Tiso_gene_10876]]
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** experimental_annotation
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** IN-SILICO_ANNOTATION
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***ec-number
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***EC-NUMBER
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* [[RXN-12184]]
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* [[Tiso_gene_13394]]
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** in-silico_annotation
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** IN-SILICO_ANNOTATION
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***ec-number
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***EC-NUMBER
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** experimental_annotation
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* [[Tiso_gene_4191]]
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***ec-number
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** IN-SILICO_ANNOTATION
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* [[RXN-12978]]
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***EC-NUMBER
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** in-silico_annotation
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** EXPERIMENTAL_ANNOTATION
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***ec-number
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***EC-NUMBER
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** experimental_annotation
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* [[Tiso_gene_7855]]
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***ec-number
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** IN-SILICO_ANNOTATION
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* [[RXN-13290]]
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***EC-NUMBER
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** in-silico_annotation
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* [[Tiso_gene_500]]
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***ec-number
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** IN-SILICO_ANNOTATION
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** experimental_annotation
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***EC-NUMBER
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***ec-number
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* [[Tiso_gene_135]]
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* [[RXN-13614]]
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** IN-SILICO_ANNOTATION
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** in-silico_annotation
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***EC-NUMBER
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***ec-number
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* [[Tiso_gene_9394]]
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** experimental_annotation
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** IN-SILICO_ANNOTATION
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***ec-number
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***EC-NUMBER
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* [[RXN-16380]]
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** EXPERIMENTAL_ANNOTATION
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** in-silico_annotation
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***EC-NUMBER
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***ec-number
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* [[Tiso_gene_136]]
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** experimental_annotation
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** IN-SILICO_ANNOTATION
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***ec-number
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***EC-NUMBER
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* [[RXN-16389]]
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== Pathways ==
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** in-silico_annotation
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== Reconstruction information  ==
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***ec-number
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* [[annotation]]:
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** experimental_annotation
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** [[pathwaytools]]:
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***ec-number
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*** [[experimental_annotation]]
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* [[RXN-16393]]
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*** [[in-silico_annotation]]
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** in-silico_annotation
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−
***ec-number
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** experimental_annotation
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−
***ec-number
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−
* [[RXN-16401]]
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** in-silico_annotation
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−
***ec-number
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** experimental_annotation
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−
***ec-number
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* [[RXN-16402]]
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** in-silico_annotation
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−
***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN-16415]]
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** in-silico_annotation
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−
***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN-16418]]
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** in-silico_annotation
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−
***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN-7904]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN-9623]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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** [[pantograph]]-[[athaliana]]
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* [[RXN-9644]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN-9673]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN0-7238]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN0-7239]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN0-7248]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN66-469]]
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** in-silico_annotation
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−
***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN66-477]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN66-480]]
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** in-silico_annotation
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−
***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN66-483]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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* [[RXN66-484]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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***ec-number
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* [[TRANS-RXN0-623]]
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** in-silico_annotation
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***ec-number
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** experimental_annotation
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−
***ec-number
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== Pathways associated ==
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−
* [[PWY-6920]]
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−
* [[P221-PWY]]
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−
* [[PWY-321]]
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−
* [[PWY-5972]]
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−
* [[PWY-5971]]
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−
* [[PWY-7033]]
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−
* [[PWY-5136]]
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−
* [[PWY66-389]]
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−
* [[PWY-7288]]
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* [[PWY-6733]]
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−
* [[PWY-7094]]
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−
* [[PWY66-391]]
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−
* [[FAO-PWY]]
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−
* [[PWY-1121]]
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−
* [[PWY-6873]]
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−
* [[PWY-5147]]
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−
* [[PWY-5143]]
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−
* [[PWY-5885]]
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−
* [[PWY-7724]]
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−
* [[PWY-6001]]
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−
* [[PWY-6000]]
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−
* [[PWY-7049]]
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−
* [[PWY66-387]]
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−
* [[PWY-5989]]
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−
* [[PWY-6803]]
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−
* [[PWY66-388]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=30916}}
+
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=polyketide_synthase}}
−
{{#set: right end position=34578}}
+
{{#set: common name=long_chain_acyl-_synthetase}}
−
{{#set: centisome position=87.89947    }}
+
{{#set: common name=ORF}}
−
{{#set: reaction associated=ACYLCOASYN-RXN|LINOLENOYL-RXN|R223-RXN|RXN-12184|RXN-12978|RXN-13290|RXN-13614|RXN-16380|RXN-16389|RXN-16393|RXN-16401|RXN-16402|RXN-16415|RXN-16418|RXN-7904|RXN-9623|RXN-9644|RXN-9673|RXN0-7238|RXN0-7239|RXN0-7248|RXN66-469|RXN66-477|RXN66-480|RXN66-483|RXN66-484|TRANS-RXN0-623}}
+
{{#set: common name=acyl-_synthetase}}
−
{{#set: pathway associated=PWY-6920|P221-PWY|PWY-321|PWY-5972|PWY-5971|PWY-7033|PWY-5136|PWY66-389|PWY-7288|PWY-6733|PWY-7094|PWY66-391|FAO-PWY|PWY-1121|PWY-6873|PWY-5147|PWY-5143|PWY-5885|PWY-7724|PWY-6001|PWY-6000|PWY-7049|PWY66-387|PWY-5989|PWY-6803|PWY66-388}}
+
{{#set: ec number=EC-6.2.1.3}}
 +
{{#set: gene associated=Tiso_gene_348|Tiso_gene_10876|Tiso_gene_13394|Tiso_gene_4191|Tiso_gene_7855|Tiso_gene_500|Tiso_gene_135|Tiso_gene_9394|Tiso_gene_136}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 15:36, 10 January 2018

Reaction TRANS-RXN0-623

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • polyketide_synthase
    • long_chain_acyl-_synthetase
    • ORF
    • acyl-_synthetase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 coenzyme A[c] + 1 ATP[c] + 1 a 2,3,4-saturated fatty acid[e] + 1 H+[e] => 1 AMP[c] + 1 H+[c] + 1 a 2,3,4-saturated fatty acyl CoA[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_8153&oldid=9733"