Difference between revisions of "RXN-11245"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRANS-RXN0-623 TRANS-RXN0-623] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_syntha...")
 
(Created page with "Category:Gene == Gene Tiso_gene_8353 == * left end position: ** 4577 * transcription direction: ** NEGATIVE * right end position: ** 6959 * centisome position: ** 44.35937...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRANS-RXN0-623 TRANS-RXN0-623] ==
+
== Gene Tiso_gene_8353 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 4577
−
* common name:
+
* transcription direction:
−
** polyketide_synthase
+
** NEGATIVE
−
** long_chain_acyl-_synthetase
+
* right end position:
−
** ORF
+
** 6959
−
** acyl-_synthetase
+
* centisome position:
−
* ec number:
+
** 44.35937   
−
** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* [[LYSOPHOSPHOLIPASE-RXN]]
−
** 1 [[ATP]][c] '''+''' 1 [[PROTON]][e] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CPD66-39]][e] '''=>''' 1 [[Saturated-Fatty-Acyl-CoA]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c]
+
** experimental_annotation
−
* With common name(s):
+
***automated-name-match
−
** 1 ATP[c] '''+''' 1 H+[e] '''+''' 1 coenzyme A[c] '''+''' 1 a 2,3,4-saturated fatty acid[e] '''=>''' 1 a 2,3,4-saturated fatty acyl CoA[c] '''+''' 1 H+[c] '''+''' 1 diphosphate[c] '''+''' 1 AMP[c]
+
* [[RXN-15035]]
−
 
+
** experimental_annotation
−
== Genes associated with this reaction  ==
+
***automated-name-match
−
Genes have been associated with this reaction based on different elements listed below.
+
== Pathways associated ==
−
* [[Tiso_gene_348]]
+
* [[PWY-7409]]
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_7855]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_4191]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_136]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_10876]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_500]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_135]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_13394]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_9394]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
== Pathways ==
+
−
== Reconstruction information  ==
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: left end position=4577}}
−
{{#set: common name=polyketide_synthase}}
+
{{#set: transcription direction=NEGATIVE}}
−
{{#set: common name=long_chain_acyl-_synthetase}}
+
{{#set: right end position=6959}}
−
{{#set: common name=ORF}}
+
{{#set: centisome position=44.35937    }}
−
{{#set: common name=acyl-_synthetase}}
+
{{#set: reaction associated=LYSOPHOSPHOLIPASE-RXN|RXN-15035}}
−
{{#set: ec number=EC-6.2.1.3}}
+
{{#set: pathway associated=PWY-7409}}
−
{{#set: gene associated=Tiso_gene_348|Tiso_gene_7855|Tiso_gene_4191|Tiso_gene_136|Tiso_gene_10876|Tiso_gene_500|Tiso_gene_135|Tiso_gene_13394|Tiso_gene_9394}}
+
−
{{#set: in pathway=}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Revision as of 16:36, 10 January 2018

Gene Tiso_gene_8353

  • left end position:
    • 4577
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 6959
  • centisome position:
    • 44.35937
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-11245&oldid=9749"