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| − | [[Category:Reaction]] | + | [[Category:Gene]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRROLINECARBREDUCT-RXN PYRROLINECARBREDUCT-RXN] == | + | == Gene Tiso_gene_13909 == |
| − | * direction: | + | * left end position: |
| − | ** LEFT-TO-RIGHT | + | ** 3330 |
| − | * common name: | + | * transcription direction: |
| − | ** pyrroline-5-carboxylate_reductase | + | ** POSITIVE |
| − | ** ORF | + | * right end position: |
| − | ** ankyrin_repeat-containing_protein | + | ** 4667 |
| − | * ec number: | + | * centisome position: |
| − | ** [http://enzyme.expasy.org/EC/1.5.1.2 EC-1.5.1.2] | + | ** 55.73222 |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| − | == Reaction Formula == | + | == Reactions associated == |
| − | * With identifiers:
| + | * [[ACP]] |
| − | ** 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[L-DELTA1-PYRROLINE_5-CARBOXYLATE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[PRO]][c] '''+''' 1 [[NAD-P-OR-NOP]][c]
| + | ** [[pantograph]]-[[creinhardtii]] |
| − | * With common name(s):
| + | * [[ACPh]] |
| − | ** 1 NAD(P)H[c] '''+''' 1 (S)-1-pyrroline-5-carboxylate[c] '''+''' 2 H+[c] '''=>''' 1 L-proline[c] '''+''' 1 NAD(P)+[c]
| + | ** [[pantograph]]-[[creinhardtii]] |
| − | | + | * [[ACYLPHOSPHATASE-RXN]] |
| − | == Genes associated with this reaction ==
| + | ** in-silico_annotation |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | ***ec-number |
| − | * [[Tiso_gene_20218]] | + | * [[APhi]] |
| − | ** IN-SILICO_ANNOTATION | + | ** [[pantograph]]-[[creinhardtii]] |
| − | ***AUTOMATED-NAME-MATCH
| + | == Pathways associated == |
| − | * [[Tiso_gene_17059]] | + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | * [[Tiso_gene_19254]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | * [[Tiso_gene_8625]] | + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** EXPERIMENTAL_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** [[pantograph]]-[[esiliculosus]] | + | |
| − | == Pathways ==
| + | |
| − | * [[PWY-6344]], L-ornithine degradation II (Stickland reaction): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6344 PWY-6344] | + | |
| − | ** '''4''' reactions found over '''9''' reactions in the full pathway | + | |
| − | * [[ARG-PRO-PWY]], L-arginine degradation VI (arginase 2 pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARG-PRO-PWY ARG-PRO-PWY]
| + | |
| − | ** '''4''' reactions found over '''4''' reactions in the full pathway | + | |
| − | * [[PROSYN-PWY]], L-proline biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PROSYN-PWY PROSYN-PWY] | + | |
| − | ** '''4''' reactions found over '''4''' reactions in the full pathway | + | |
| − | * [[PWY-4981]], L-proline biosynthesis II (from arginine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-4981 PWY-4981] | + | |
| − | ** '''4''' reactions found over '''6''' reactions in the full pathway
| + | |
| − | * [[PWY-3341]], L-proline biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3341 PWY-3341]
| + | |
| − | ** '''5''' reactions found over '''5''' reactions in the full pathway
| + | |
| − | == Reconstruction information == | + | |
| − | * [[orthology]]:
| + | |
| − | ** [[pantograph]]:
| + | |
| − | *** [[esiliculosus]]
| + | |
| − | * [[manual]]:
| + | |
| − | ** [[primary_network]]
| + | |
| − | * [[annotation]]:
| + | |
| − | ** [[pathwaytools]]:
| + | |
| − | *** [[experimental_annotation]]
| + | |
| − | *** [[in-silico_annotation]]
| + | |
| | == External links == | | == External links == |
| − | * LIGAND-RXN:
| + | {{#set: left end position=3330}} |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R01248 R01248]
| + | {{#set: transcription direction=POSITIVE}} |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R01251 R01251]
| + | {{#set: right end position=4667}} |
| − | * UNIPROT:
| + | {{#set: centisome position=55.73222 }} |
| − | ** [http://www.uniprot.org/uniprot/P32322 P32322]
| + | {{#set: reaction associated=ACP|ACPh|ACYLPHOSPHATASE-RXN|APhi}} |
| − | ** [http://www.uniprot.org/uniprot/P27771 P27771]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9CEF7 Q9CEF7]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P14383 P14383]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9PNL8 Q9PNL8]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9JWW2 Q9JWW2]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q12740 Q12740]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P22008 P22008]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P54904 P54904]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P0A9L8 P0A9L8]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P17817 P17817]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P32263 P32263]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q12641 Q12641]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P46725 P46725]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P74572 P74572]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q04708 Q04708]
| + | |
| − | {{#set: direction=LEFT-TO-RIGHT}} | + | |
| − | {{#set: common name=pyrroline-5-carboxylate_reductase}} | + | |
| − | {{#set: common name=ORF}} | + | |
| − | {{#set: common name=ankyrin_repeat-containing_protein}} | + | |
| − | {{#set: ec number=EC-1.5.1.2}}
| + | |
| − | {{#set: gene associated=Tiso_gene_20218|Tiso_gene_17059|Tiso_gene_19254|Tiso_gene_8625}} | + | |
| − | {{#set: in pathway=PWY-6344|ARG-PRO-PWY|PROSYN-PWY|PWY-4981|PWY-3341}}
| + | |
| − | {{#set: reconstruction category=orthology}}
| + | |
| − | {{#set: reconstruction tool=pantograph}}
| + | |
| − | {{#set: reconstruction source=esiliculosus}}
| + | |
| − | {{#set: reconstruction category=manual}}
| + | |
| − | {{#set: reconstruction source=primary_network}}
| + | |
| − | {{#set: reconstruction category=annotation}}
| + | |
| − | {{#set: reconstruction tool=pathwaytools}}
| + | |
| − | {{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
| + | |
