Difference between revisions of "HOMOGENTISATE-12-DIOXYGENASE-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD1F-115 CPD1F-115] == * smiles: ** CC(=CCCC(=CC=CC(=CC=CC(=CC=CC=C(C=CC=C(C=CC1(C(CCC=C1C)(C)...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=BIOTINLIG-RXN BIOTINLIG-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * ec number: **...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD1F-115 CPD1F-115] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=BIOTINLIG-RXN BIOTINLIG-RXN] ==
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* smiles:
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* direction:
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** CC(=CCCC(=CC=CC(=CC=CC(=CC=CC=C(C=CC=C(C=CC1(C(CCC=C1C)(C)C))C)C)C)C)C)C
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=WGIYGODPCLMGQH-GOXCNPTKSA-N
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* common name:
 
* common name:
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** δ-carotene
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** ORF
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* molecular weight:
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* ec number:
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** 536.882   
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** [http://enzyme.expasy.org/EC/6.3.4.15 EC-6.3.4.15]
 
* Synonym(s):
 
* Synonym(s):
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** ε,ψ-carotene
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-8028]]
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* With identifiers:
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* [[RXN1F-148]]
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** 1 [[ATP]][c] '''+''' 1 [[BCCP-monomers]][c] '''+''' 1 [[BIOTIN]][c] '''=>''' 1 [[BCCP-biotin-monomers]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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* [[RXN1F-147]]
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** 1 ATP[c] '''+''' 1 a [biotin-carboxyl-carrier protein monomer][c] '''+''' 1 biotin[c] '''=>''' 1 a biotinylated [BCCP monomer][c] '''+''' 1 H+[c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_8713]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_17216]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_14184]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY0-1264]], biotin-carboxyl carrier protein assembly: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1264 PWY0-1264]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* UNIPROT:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5281230 5281230]
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** [http://www.uniprot.org/uniprot/P06709 P06709]
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* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/Q9PJ27 Q9PJ27]
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** [http://www.chemspider.com/Chemical-Structure.4444642.html 4444642]
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** [http://www.uniprot.org/uniprot/Q9CEQ6 Q9CEQ6]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/Q9CED9 Q9CED9]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=27705 27705]
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** [http://www.uniprot.org/uniprot/Q9JWI7 Q9JWI7]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P48445 P48445]
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** [http://www.genome.jp/dbget-bin/www_bget?C08586 C08586]
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** [http://www.uniprot.org/uniprot/P72816 P72816]
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* HMDB : HMDB36925
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: smiles=CC(=CCCC(=CC=CC(=CC=CC(=CC=CC=C(C=CC=C(C=CC1(C(CCC=C1C)(C)C))C)C)C)C)C)C}}
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{{#set: common name=ORF}}
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{{#set: inchi key=InChIKey=WGIYGODPCLMGQH-GOXCNPTKSA-N}}
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{{#set: ec number=EC-6.3.4.15}}
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{{#set: common name=δ-carotene}}
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{{#set: gene associated=Tiso_gene_8713|Tiso_gene_17216|Tiso_gene_14184}}
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{{#set: molecular weight=536.882    }}
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{{#set: in pathway=PWY0-1264}}
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{{#set: common name=ε,ψ-carotene}}
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{{#set: reconstruction category=orthology}}
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{{#set: consumed by=RXN-8028|RXN1F-148}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: produced by=RXN1F-147}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}

Revision as of 16:38, 10 January 2018

Reaction BIOTINLIG-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 a [biotin-carboxyl-carrier protein monomer][c] + 1 biotin[c] => 1 a biotinylated [BCCP monomer][c] + 1 H+[c] + 1 AMP[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-1264, biotin-carboxyl carrier protein assembly: PWY0-1264
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links






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