Difference between revisions of "P181-PWY"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PHOSLIPSYN2-PWY PHOSLIPSYN2-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=T...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16540 RXN-16540] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-coenzyme_a_oxidase **...")
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PHOSLIPSYN2-PWY PHOSLIPSYN2-PWY] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16540 RXN-16540] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** superpathway of phospholipid biosynthesis II (plants)
+
** acyl-coenzyme_a_oxidase
 +
** ORF
 +
** acyl-_dehydrogenase
 +
** acyl-CoA_dehydrogenase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.3.8.9 EC-1.3.8.9]
 
* Synonym(s):
 
* Synonym(s):
−
** phosphoglyceride biosynthesis
 
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
* '''8''' reaction(s) found
+
* With identifiers:
−
** [[PWY4FS-6]]
+
** 1 [[PALMITYL-COA]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ETF-Oxidized]][c] '''=>''' 1 [[CPD0-2117]][c] '''+''' 1 [[ETF-Reduced]][c]
−
** [[PWY4FS-7]]
+
* With common name(s):
−
** [[PWY4FS-8]]
+
** 1 palmitoyl-CoA[c] '''+''' 1 H+[c] '''+''' 1 an oxidized electron-transfer flavoprotein[c] '''=>''' 1 trans-hexadec-2-enoyl-CoA[c] '''+''' 1 a reduced electron-transfer flavoprotein[c]
−
** [[PWY3O-450]]
+
 
−
** [[2.7.8.11-RXN]]
+
== Genes associated with this reaction  ==
−
** [[PWY-5669]]
+
Genes have been associated with this reaction based on different elements listed below.
−
** [[PWY-5667]]
+
* [[Tiso_gene_5991]]
−
** [[PWY0-1319]]
+
** IN-SILICO_ANNOTATION
−
== Reaction(s) not found ==
+
***EC-NUMBER
−
* '''5''' reaction(s) not found
+
* [[Tiso_gene_18566]]
−
** [http://metacyc.org/META/NEW-IMAGE?object=PWY4FS-2 PWY4FS-2]
+
** IN-SILICO_ANNOTATION
−
** [http://metacyc.org/META/NEW-IMAGE?object=PWY4FS-3 PWY4FS-3]
+
***EC-NUMBER
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-1382 RXN-1382]
+
* [[Tiso_gene_16631]]
−
** [http://metacyc.org/META/NEW-IMAGE?object=PWY4FS-4 PWY4FS-4]
+
** IN-SILICO_ANNOTATION
−
** [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHASERSYN-RXN PHOSPHASERSYN-RXN]
+
***EC-NUMBER
 +
* [[Tiso_gene_883]]
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_6475]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_17967]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
== Pathways  ==
 +
* [[PWY-7654]], (8E,10E)-dodeca-8,10-dienol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7654 PWY-7654]
 +
** '''6''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-7656]], Spodoptera littoralis pheromone biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7656 PWY-7656]
 +
** '''6''' reactions found over '''22''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* [[annotation]]:
 +
** [[pathwaytools]]:
 +
*** [[experimental_annotation]]
 +
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
−
* ARACYC:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://metacyc.org/ARA/NEW-IMAGE?object=PHOSLIPSYN2-PWY PHOSLIPSYN2-PWY]
+
{{#set: common name=acyl-coenzyme_a_oxidase}}
−
{{#set: taxonomic range=TAX-33090}}
+
{{#set: common name=ORF}}
−
{{#set: common name=superpathway of phospholipid biosynthesis II (plants)}}
+
{{#set: common name=acyl-_dehydrogenase}}
−
{{#set: common name=phosphoglyceride biosynthesis}}
+
{{#set: common name=acyl-CoA_dehydrogenase}}
−
{{#set: reaction found=8}}
+
{{#set: ec number=EC-1.3.8.9}}
−
{{#set: reaction not found=5}}
+
{{#set: gene associated=Tiso_gene_5991|Tiso_gene_18566|Tiso_gene_16631|Tiso_gene_883|Tiso_gene_6475|Tiso_gene_17967}}
 +
{{#set: in pathway=PWY-7654|PWY-7656}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 15:38, 10 January 2018

Reaction RXN-16540

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • acyl-coenzyme_a_oxidase
    • ORF
    • acyl-_dehydrogenase
    • acyl-CoA_dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 palmitoyl-CoA[c] + 1 H+[c] + 1 an oxidized electron-transfer flavoprotein[c] => 1 trans-hexadec-2-enoyl-CoA[c] + 1 a reduced electron-transfer flavoprotein[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7654, (8E,10E)-dodeca-8,10-dienol biosynthesis: PWY-7654
    • 6 reactions found over 11 reactions in the full pathway
  • PWY-7656, Spodoptera littoralis pheromone biosynthesis: PWY-7656
    • 6 reactions found over 22 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=P181-PWY&oldid=9873"