Difference between revisions of "RXN-15043"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.1.3.37-RXN 1.1.3.37-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** xylitol_oxidas...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD1F-115 CPD1F-115] == * smiles: ** CC(=CCCC(=CC=CC(=CC=CC(=CC=CC=C(C=CC=C(C=CC1(C(CCC=C1C)(C)...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.1.3.37-RXN 1.1.3.37-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD1F-115 CPD1F-115] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CC(=CCCC(=CC=CC(=CC=CC(=CC=CC=C(C=CC=C(C=CC1(C(CCC=C1C)(C)C))C)C)C)C)C)C
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* inchi key:
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** InChIKey=WGIYGODPCLMGQH-GOXCNPTKSA-N
 
* common name:
 
* common name:
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** ORF
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** δ-carotene
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** xylitol_oxidase
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* molecular weight:
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** mitochondrial_l-galactono-_-lactone_dehydrogenase
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** 536.882   
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* ec number:
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** [http://enzyme.expasy.org/EC/1.1.3.37 EC-1.1.3.37]
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* Synonym(s):
 
* Synonym(s):
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** ε,ψ-carotene
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN-8028]]
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** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-356]][c] '''=>''' 1 [[CPD-1789]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
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* [[RXN1F-148]]
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* With common name(s):
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== Reaction(s) known to produce the compound ==
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** 1 oxygen[c] '''+''' 1 D-arabinono-1,4-lactone[c] '''=>''' 1 dehydro-D-arabinono-1,4-lactone[c] '''+''' 1 hydrogen peroxide[c]
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* [[RXN1F-147]]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_14187]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_6787]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_210]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY3O-6]], dehydro-D-arabinono-1,4-lactone biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-6 PWY3O-6]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23756 23756]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5281230 5281230]
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* LIGAND-RXN:
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* CHEMSPIDER:
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** [http://www.genome.jp/dbget-bin/www_bget?R02715 R02715]
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** [http://www.chemspider.com/Chemical-Structure.4444642.html 4444642]
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{{#set: direction=LEFT-TO-RIGHT}}
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* CHEBI:
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{{#set: common name=ORF}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=27705 27705]
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{{#set: common name=xylitol_oxidase}}
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* LIGAND-CPD:
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{{#set: common name=mitochondrial_l-galactono-_-lactone_dehydrogenase}}
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** [http://www.genome.jp/dbget-bin/www_bget?C08586 C08586]
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{{#set: ec number=EC-1.1.3.37}}
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* HMDB : HMDB36925
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{{#set: gene associated=Tiso_gene_14187|Tiso_gene_6787|Tiso_gene_210}}
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{{#set: smiles=CC(=CCCC(=CC=CC(=CC=CC(=CC=CC=C(C=CC=C(C=CC1(C(CCC=C1C)(C)C))C)C)C)C)C)C}}
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{{#set: in pathway=PWY3O-6}}
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{{#set: inchi key=InChIKey=WGIYGODPCLMGQH-GOXCNPTKSA-N}}
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{{#set: reconstruction category=annotation}}
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{{#set: common name=δ-carotene}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: molecular weight=536.882    }}
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{{#set: reconstruction source=in-silico_annotation}}
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{{#set: common name=ε,ψ-carotene}}
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{{#set: consumed by=RXN-8028|RXN1F-148}}
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{{#set: produced by=RXN1F-147}}

Revision as of 15:39, 10 January 2018

Metabolite CPD1F-115

  • smiles:
    • CC(=CCCC(=CC=CC(=CC=CC(=CC=CC=C(C=CC=C(C=CC1(C(CCC=C1C)(C)C))C)C)C)C)C)C
  • inchi key:
    • InChIKey=WGIYGODPCLMGQH-GOXCNPTKSA-N
  • common name:
    • δ-carotene
  • molecular weight:
    • 536.882
  • Synonym(s):
    • ε,ψ-carotene

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links




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