Difference between revisions of "Tiso gene 18264"

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(Created page with "Category:Gene == Gene Tiso_gene_10448 == * left end position: ** 222 * transcription direction: ** POSITIVE * right end position: ** 5182 * centisome position: ** 2.601664...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9310 RXN-9310] == * direction: ** LEFT-TO-RIGHT * common name: ** protein_chloroplastic * ec nu...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_10448 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9310 RXN-9310] ==
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* left end position:
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* direction:
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** 222
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** protein_chloroplastic
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* right end position:
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* ec number:
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** 5182
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** [http://enzyme.expasy.org/EC/4.2.99.20 EC-4.2.99.20]
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* centisome position:
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** 2.601664   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[2.4.1.119-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[CPD-9924]][c] '''=>''' 1 [[PYRUVATE]][c] '''+''' 1 [[CPD-9923]][c]
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***automated-name-match
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* With common name(s):
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** [[pantograph]]-[[esiliculosus]]
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** 1 2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate[c] '''=>''' 1 pyruvate[c] '''+''' 1 (1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate[c]
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== Pathways associated ==
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* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_1922]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-5837]], 1,4-dihydroxy-2-naphthoate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5837 PWY-5837]
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** '''4''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=222}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25597 25597]
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{{#set: right end position=5182}}
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* LIGAND-RXN:
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{{#set: centisome position=2.601664    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R08166 R08166]
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{{#set: reaction associated=2.4.1.119-RXN}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: pathway associated=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
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{{#set: common name=protein_chloroplastic}}
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{{#set: ec number=EC-4.2.99.20}}
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{{#set: gene associated=Tiso_gene_1922}}
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{{#set: in pathway=PWY-5837}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}

Revision as of 15:40, 10 January 2018

Reaction RXN-9310

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • protein_chloroplastic
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate[c] => 1 pyruvate[c] + 1 (1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5837, 1,4-dihydroxy-2-naphthoate biosynthesis: PWY-5837
    • 4 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_18264&oldid=9978"