Difference between revisions of "RXN-11919"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRANS-CINNAMATE-4-MONOOXYGENASE-RXN TRANS-CINNAMATE-4-MONOOXYGENASE-RXN] == * direction: ** LEFT-TO...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11919 RXN-11919] == * direction: ** LEFT-TO-RIGHT * common name: ** (2E)-5-methylhexa-2,4-dieno...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRANS-CINNAMATE-4-MONOOXYGENASE-RXN TRANS-CINNAMATE-4-MONOOXYGENASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11919 RXN-11919] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** (2E)-5-methylhexa-2,4-dienoyl-CoA hydratase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.14.13.11 EC-1.14.13.11]
+
** [http://enzyme.expasy.org/EC/4.2.1 EC-4.2.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-674]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[COUMARATE]][c] '''+''' 1 [[WATER]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[CPD-12904]][c] '''=>''' 1 [[CPD-12905]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 trans-cinnamate[c] '''+''' 1 H+[c] '''+''' 1 oxygen[c] '''+''' 1 NADPH[c] '''=>''' 1 NADP+[c] '''+''' 1 4-coumarate[c] '''+''' 1 H2O[c]
+
** 1 H2O[c] '''+''' 1 (2E)-5-methylhexa-2,4-dienoyl-CoA[c] '''=>''' 1 3-hydroxy-5-methylhex-4-enoyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_1547]]
+
* Gene: [[Tiso_gene_14257]]
−
** [[pantograph]]-[[athaliana]]
+
** Source: [[orthology-esiliculosus]]
−
* [[Tiso_gene_8263]]
+
−
** [[pantograph]]-[[athaliana]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY1F-467]], phenylpropanoid biosynthesis, initial reactions: [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-467 PWY1F-467]
+
* [[PWY-6672]], cis-genanyl-CoA degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6672 PWY-6672]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''4''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-1121]], suberin monomers biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1121 PWY-1121]
+
−
** '''9''' reactions found over '''19''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-esiliculosus]]
−
*** [[athaliana]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10608 10608]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02253 R02253]
+
** [http://www.genome.jp/dbget-bin/www_bget?R08093 R08093]
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/Q04468 Q04468]
+
−
** [http://www.uniprot.org/uniprot/P37115 P37115]
+
−
** [http://www.uniprot.org/uniprot/Q9S8R8 Q9S8R8]
+
−
** [http://www.uniprot.org/uniprot/P48522 P48522]
+
−
** [http://www.uniprot.org/uniprot/Q42895 Q42895]
+
−
** [http://www.uniprot.org/uniprot/O81928 O81928]
+
−
** [http://www.uniprot.org/uniprot/O24315 O24315]
+
−
** [http://www.uniprot.org/uniprot/Q43033 Q43033]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-1.14.13.11}}
+
{{#set: common name=(2E)-5-methylhexa-2,4-dienoyl-CoA hydratase}}
−
{{#set: gene associated=Tiso_gene_1547|Tiso_gene_8263}}
+
{{#set: ec number=EC-4.2.1}}
−
{{#set: in pathway=PWY1F-467|PWY-1121}}
+
{{#set: gene associated=Tiso_gene_14257}}
 +
{{#set: in pathway=PWY-6672}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-esiliculosus}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=athaliana}}
 

Latest revision as of 19:09, 21 March 2018

Reaction RXN-11919

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • (2E)-5-methylhexa-2,4-dienoyl-CoA hydratase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 (2E)-5-methylhexa-2,4-dienoyl-CoA[c] => 1 3-hydroxy-5-methylhex-4-enoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6672, cis-genanyl-CoA degradation: PWY-6672
    • 4 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-11919&oldid=39788"