Difference between revisions of "PWY-5064"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GUANIDINOBUTANAMIDE-NH3-RXN GUANIDINOBUTANAMIDE-NH3-RXN] == * direction: ** LEFT-TO-RIGHT * common...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5064 PWY-5064] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-3...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GUANIDINOBUTANAMIDE-NH3-RXN GUANIDINOBUTANAMIDE-NH3-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5064 PWY-5064] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
* common name:
 
* common name:
** amidase
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** chlorophyll a biosynthesis II
* ec number:
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** [http://enzyme.expasy.org/EC/3.5.1.4 EC-3.5.1.4]
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* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''5''' reactions found over '''5''' reactions in the full pathway
** 1 [[WATER]][c] '''+''' 1 [[4-GUANIDO-BUTYRAMIDE]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[CPD-592]][c]
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* [[RXN-5286]]
* With common name(s):
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** 1 associated gene(s):
** 1 H2O[c] '''+''' 1 4-guanidinobutyramide[c] '''=>''' 1 ammonium[c] '''+''' 1 4-guanidinobutanoate[c]
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*** [[Tiso_gene_13868]]
 
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** 2 reconstruction source(s) associated:
== Genes associated with this reaction  ==
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*** [[manual-primary_network]]
Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-creinhardtii]]
* [[Tiso_gene_7596]]
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* [[RXN-7663]]
** [[pantograph]]-[[creinhardtii]]
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** 1 associated gene(s):
* [[Tiso_gene_13682]]
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*** [[Tiso_gene_19542]]
** IN-SILICO_ANNOTATION
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** 3 reconstruction source(s) associated:
***AUTOMATED-NAME-MATCH
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*** [[annotation-in-silico_annotation]]
** [[pantograph]]-[[creinhardtii]]
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*** [[manual-primary_network]]
== Pathways  ==
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*** [[orthology-creinhardtii]]
* [[ARGDEG-V-PWY]], L-arginine degradation X (arginine monooxygenase pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARGDEG-V-PWY ARGDEG-V-PWY]
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* [[RXN-7664]]
** '''3''' reactions found over '''3''' reactions in the full pathway
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** 1 associated gene(s):
== Reconstruction information  ==
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*** [[Tiso_gene_2613]]
* [[orthology]]:
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** 2 reconstruction source(s) associated:
** [[pantograph]]:
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*** [[annotation-in-silico_annotation]]
*** [[creinhardtii]]
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*** [[annotation-experimental_annotation]]
* [[annotation]]:
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* [[RXN-7665]]
** [[pathwaytools]]:
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** 1 associated gene(s):
*** [[in-silico_annotation]]
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*** [[Tiso_gene_2613]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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* [[RXN-7666]]
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** 1 associated gene(s):
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*** [[Tiso_gene_2613]]
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** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
* RHEA:
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* ARACYC:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34375 34375]
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-5064 PWY-5064]
* LIGAND-RXN:
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{{#set: taxonomic range=TAX-33090}}
** [http://www.genome.jp/dbget-bin/www_bget?R03180 R03180]
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{{#set: common name=chlorophyll a biosynthesis II}}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction found=5}}
{{#set: common name=amidase}}
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{{#set: total reaction=5}}
{{#set: ec number=EC-3.5.1.4}}
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{{#set: completion rate=100.0}}
{{#set: gene associated=Tiso_gene_7596|Tiso_gene_13682}}
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{{#set: in pathway=ARGDEG-V-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 19:10, 21 March 2018

Pathway PWY-5064

  • taxonomic range:
  • common name:
    • chlorophyll a biosynthesis II
  • Synonym(s):

Reaction(s) found

5 reactions found over 5 reactions in the full pathway

Reaction(s) not found

External links