Difference between revisions of "PWY-6891"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9543 RXN-9543] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6891 PWY-6891] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Category:Reaction]]
+
[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9543 RXN-9543] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6891 PWY-6891] ==
* direction:
+
* taxonomic range:
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
* ec number:
+
* common name:
** [http://enzyme.expasy.org/EC/2.3.1.199 EC-2.3.1.199]
+
** thiazole biosynthesis II (aerobic bacteria)
 
* Synonym(s):
 
* Synonym(s):
 +
** 2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate biosynthesis
  
== Reaction Formula ==
+
== Reaction(s) found ==
* With identifiers:
+
'''2''' reactions found over '''7''' reactions in the full pathway
** 1 [[PROTON]][c] '''+''' 1 [[MALONYL-COA]][c] '''+''' 1 [[PALMITYL-COA]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CPD-10260]][c]
+
* [[DXS-RXN]]
* With common name(s):
+
** 1 associated gene(s):
** 1 H+[c] '''+''' 1 malonyl-CoA[c] '''+''' 1 palmitoyl-CoA[c] '''=>''' 1 CO2[c] '''+''' 1 coenzyme A[c] '''+''' 1 3-oxo-stearoyl-CoA[c]
+
*** [[Tiso_gene_17311]]
 
+
** 7 reconstruction source(s) associated:
== Genes associated with this reaction  ==
+
*** [[annotation-experimental_annotation]]
Genes have been associated with this reaction based on different elements listed below.
+
*** [[orthology-esiliculosus]]
* [[Tiso_gene_6671]]
+
*** [[annotation-in-silico_annotation]]
** [[pantograph]]-[[creinhardtii]]
+
*** [[orthology-athaliana]]
== Pathways  ==
+
*** [[orthology-synechocystis]]
* [[PWY-5972]], stearate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5972 PWY-5972]
+
*** [[manual-primary_network]]
** '''4''' reactions found over '''6''' reactions in the full pathway
+
*** [[orthology-creinhardtii]]
== Reconstruction information  ==
+
* [[RXN0-308]]
* [[orthology]]:
+
** 3 associated gene(s):
** [[pantograph]]:
+
*** [[Tiso_gene_4284]]
*** [[creinhardtii]]
+
*** [[Tiso_gene_11478]]
 +
*** [[Tiso_gene_14710]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12609 RXN-12609]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12614 RXN-12614]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12621 RXN-12621]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9789 RXN-9789]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=THIAZOLSYN2-RXN THIAZOLSYN2-RXN]
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
+
{{#set: taxonomic range=TAX-2}}
** [http://www.genome.jp/dbget-bin/www_bget?R07758 R07758]
+
{{#set: common name=thiazole biosynthesis II (aerobic bacteria)}}
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: common name=2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate biosynthesis}}
{{#set: ec number=EC-2.3.1.199}}
+
{{#set: reaction found=2}}
{{#set: gene associated=Tiso_gene_6671}}
+
{{#set: total reaction=7}}
{{#set: in pathway=PWY-5972}}
+
{{#set: completion rate=29.0}}
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=creinhardtii}}
+

Latest revision as of 19:11, 21 March 2018

Pathway PWY-6891

  • taxonomic range:
  • common name:
    • thiazole biosynthesis II (aerobic bacteria)
  • Synonym(s):
    • 2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate biosynthesis

Reaction(s) found

2 reactions found over 7 reactions in the full pathway

Reaction(s) not found

External links