Difference between revisions of "RXN0-949"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=P-PANTOCYSLIG-RXN P-PANTOCYSLIG-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzym...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-949 RXN0-949] == * direction: ** LEFT-TO-RIGHT * common name: ** lipoyl_synthase_mitochondrial...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=P-PANTOCYSLIG-RXN P-PANTOCYSLIG-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-949 RXN0-949] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** lipoyl_synthase_mitochondrial
 +
** lipoyl_mitochondrial
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.3.2.5 EC-6.3.2.5]
+
** [http://enzyme.expasy.org/EC/2.8.1.8 EC-2.8.1.8]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[4-P-PANTOTHENATE]][c] '''+''' 1 [[CYS]][c] '''+''' 1 [[CTP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[R-4-PHOSPHOPANTOTHENOYL-L-CYSTEINE]][c] '''+''' 1 [[CMP]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[Octanoylated-domains]][c] '''+''' 2 [[Sulfurated-Sulfur-Acceptors]][c] '''+''' 2 [[S-ADENOSYLMETHIONINE]][c] '''+''' 2 [[Reduced-2Fe-2S-Ferredoxins]][c] '''=>''' 2 [[Oxidized-2Fe-2S-Ferredoxins]][c] '''+''' 2 [[Unsulfurated-Sulfur-Acceptors]][c] '''+''' 2 [[CH33ADO]][c] '''+''' 1 [[Lipoyl-Protein-N6-lipoyllysine]][c] '''+''' 2 [[MET]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 (R)-4'-phosphopantothenate[c] '''+''' 1 L-cysteine[c] '''+''' 1 CTP[c] '''=>''' 1 diphosphate[c] '''+''' 1 R-4'-phosphopantothenoyl-L-cysteine[c] '''+''' 1 CMP[c] '''+''' 1 H+[c]
+
** 1 a [lipoyl-carrier protein] N6-octanoyl-L-lysine[c] '''+''' 2 a sulfurated [sulfur carrier][c] '''+''' 2 S-adenosyl-L-methionine[c] '''+''' 2 a reduced [2Fe-2S] ferredoxin[c] '''=>''' 2 an oxidized [2Fe-2S] ferredoxin[c] '''+''' 2 an unsulfurated [sulfur carrier][c] '''+''' 2 5'-deoxyadenosine[c] '''+''' 1 a [lipoyl-carrier protein]-N6-lipoyl-L-lysine[c] '''+''' 2 L-methionine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_15171]]
+
* Gene: [[Tiso_gene_8049]]
−
** [[pantograph]]-[[synechocystis]]
+
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_437]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[COA-PWY]], coenzyme A biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=COA-PWY COA-PWY]
+
* [[PWY-6987]], lipoate biosynthesis and incorporation III (Bacillus): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6987 PWY-6987]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY0-1275]], lipoate biosynthesis and incorporation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1275 PWY0-1275]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY0-501]], lipoate biosynthesis and incorporation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-501 PWY0-501]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[synechocystis]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25157 25157]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04231 R04231]
+
** [http://www.genome.jp/dbget-bin/www_bget?R07767 R07767]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-6.3.2.5}}
+
{{#set: common name=lipoyl_synthase_mitochondrial}}
−
{{#set: gene associated=Tiso_gene_15171}}
+
{{#set: common name=lipoyl_mitochondrial}}
−
{{#set: in pathway=COA-PWY}}
+
{{#set: ec number=EC-2.8.1.8}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: gene associated=Tiso_gene_8049|Tiso_gene_437}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: in pathway=PWY-6987|PWY0-1275|PWY0-501}}
−
{{#set: reconstruction source=synechocystis}}
+
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:11, 21 March 2018

Reaction RXN0-949

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • lipoyl_synthase_mitochondrial
    • lipoyl_mitochondrial
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6987, lipoate biosynthesis and incorporation III (Bacillus): PWY-6987
    • 2 reactions found over 3 reactions in the full pathway
  • PWY0-1275, lipoate biosynthesis and incorporation II: PWY0-1275
    • 2 reactions found over 2 reactions in the full pathway
  • PWY0-501, lipoate biosynthesis and incorporation I: PWY0-501
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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