Difference between revisions of "FAD"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12726 RXN-12726] == * direction: ** LEFT-TO-RIGHT * common name: ** cog0031:_cysteine_synthase...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=FAD FAD] == * smiles: ** CC6(=C(C)C=C5(C(N=C1(C(=O)[N-]C(=O)N=C1N(CC(C(O)C(O)COP(OP([O-])(OCC4(...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12726 RXN-12726] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=FAD FAD] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CC6(=C(C)C=C5(C(N=C1(C(=O)[N-]C(=O)N=C1N(CC(C(O)C(O)COP(OP([O-])(OCC4(C(O)C(O)C(N3(C=NC2(C(N)=NC=NC=23)))O4))=O)([O-])=O)O)5))=C6))
 
* common name:
 
* common name:
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** cog0031:_cysteine_synthase
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** FAD
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** cysteine_synthase
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* inchi key:
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** cysteine
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** InChIKey=IMGVNJNCCGXBHD-UYBVJOGSSA-K
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* ec number:
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* molecular weight:
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** [http://enzyme.expasy.org/EC/2.5.1.47 EC-2.5.1.47]
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** 782.533   
 
* Synonym(s):
 
* Synonym(s):
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** flavin adenine dinucleotide oxidized
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** flavin adenine dinucleotide
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** flavitan
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[MEPROPCOA-FAD-RXN]]
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** 1 [[CPD-678]][c] '''+''' 1 [[ACETYLSERINE]][c] '''=>''' 1 [[ACET]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[L-SELENOCYSTEINE]][c]
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* [[ACOA120or]]
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* With common name(s):
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* [[MCDH_2mb2coa]]
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** 1 hydrogen selenide[c] '''+''' 1 O-acetyl-L-serine[c] '''=>''' 1 acetate[c] '''+''' 1 H+[c] '''+''' 1 L-selenocysteine[c]
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* [[ACOA140or]]
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* [[ACOA160or]]
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== Genes associated with this reaction  ==
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* [[ACOA80or]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[MCDH]]
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* [[Tiso_gene_7852]]
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* [[IVCDH]]
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** IN-SILICO_ANNOTATION
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* [[ACOA40or]]
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***EC-NUMBER
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== Reaction(s) known to produce the compound ==
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** [[pantograph]]-[[athaliana]]
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* [[G3PD3]]
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** [[pantograph]]-[[esiliculosus]]
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* [[FADSYN-RXN]]
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** [[pantograph]]-[[creinhardtii]]
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== Reaction(s) of unknown directionality ==
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* [[Tiso_gene_17043]]
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* [[PPCOAOm]]
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** IN-SILICO_ANNOTATION
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* [[RXN-14264]]
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***EC-NUMBER
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* [[RXN-14193]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_819]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_6110]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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** [[pantograph]]-[[creinhardtii]]
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** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_2283]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_12184]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-6936]], seleno-amino acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6936 PWY-6936]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[creinhardtii]]
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*** [[esiliculosus]]
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*** [[athaliana]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* CAS : 146-14-5
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{{#set: common name=cog0031:_cysteine_synthase}}
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* Wikipedia : Flavin_adenine_dinucleotide
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{{#set: common name=cysteine_synthase}}
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* PUBCHEM:
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{{#set: common name=cysteine}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=46906035 46906035]
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{{#set: ec number=EC-2.5.1.47}}
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* HMDB : HMDB01248
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{{#set: gene associated=Tiso_gene_7852|Tiso_gene_17043|Tiso_gene_819|Tiso_gene_6110|Tiso_gene_2283|Tiso_gene_12184}}
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* LIGAND-CPD:
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{{#set: in pathway=PWY-6936}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00016 C00016]
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{{#set: reconstruction category=orthology}}
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* CHEMSPIDER:
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{{#set: reconstruction tool=pantograph}}
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** [http://www.chemspider.com/Chemical-Structure.13082029.html 13082029]
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{{#set: reconstruction source=creinhardtii|esiliculosus|athaliana}}
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* CHEBI:
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{{#set: reconstruction category=annotation}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57692 57692]
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{{#set: reconstruction tool=pathwaytools}}
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* BIGG : fad
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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{{#set: smiles=CC6(=C(C)C=C5(C(N=C1(C(=O)[N-]C(=O)N=C1N(CC(C(O)C(O)COP(OP([O-])(OCC4(C(O)C(O)C(N3(C=NC2(C(N)=NC=NC=23)))O4))=O)([O-])=O)O)5))=C6))}}
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{{#set: common name=FAD}}
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{{#set: inchi key=InChIKey=IMGVNJNCCGXBHD-UYBVJOGSSA-K}}
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{{#set: molecular weight=782.533    }}
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{{#set: common name=flavin adenine dinucleotide oxidized|flavin adenine dinucleotide|flavitan}}
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{{#set: consumed by=MEPROPCOA-FAD-RXN|ACOA120or|MCDH_2mb2coa|ACOA140or|ACOA160or|ACOA80or|MCDH|IVCDH|ACOA40or}}
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{{#set: produced by=G3PD3|FADSYN-RXN}}
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{{#set: reversible reaction associated=PPCOAOm|RXN-14264|RXN-14193}}

Latest revision as of 19:12, 21 March 2018

Metabolite FAD

  • smiles:
    • CC6(=C(C)C=C5(C(N=C1(C(=O)[N-]C(=O)N=C1N(CC(C(O)C(O)COP(OP([O-])(OCC4(C(O)C(O)C(N3(C=NC2(C(N)=NC=NC=23)))O4))=O)([O-])=O)O)5))=C6))
  • common name:
    • FAD
  • inchi key:
    • InChIKey=IMGVNJNCCGXBHD-UYBVJOGSSA-K
  • molecular weight:
    • 782.533
  • Synonym(s):
    • flavin adenine dinucleotide oxidized
    • flavin adenine dinucleotide
    • flavitan

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 146-14-5
  • Wikipedia : Flavin_adenine_dinucleotide
  • PUBCHEM:
  • HMDB : HMDB01248
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • BIGG : fad
"CC6(=C(C)C=C5(C(N=C1(C(=O)[N-]C(=O)N=C1N(CC(C(O)C(O)COP(OP([O-])(OCC4(C(O)C(O)C(N3(C=NC2(C(N)=NC=NC=23)))O4))=O)([O-])=O)O)5))=C6))" cannot be used as a page name in this wiki.




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