Difference between revisions of "RIBOSYN2-PWY"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-15369 CPD-15369] == * smiles: ** CCCCCCC(O)CC=CCCCCCCCC(O)CC(SCCNC(=O)CCNC(=O)C(O)C(C)(C)CO...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-330...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Pathway]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-15369 CPD-15369] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY] ==
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* smiles:
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* taxonomic range:
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** CCCCCCC(O)CC=CCCCCCCCC(O)CC(SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])=O
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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* inchi key:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** InChIKey=CHMQNMKVOYFHHX-SGPQCWJRSA-J
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* common name:
 
* common name:
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** 3R-hydroxy-lesqueroloyl-CoA
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** flavin biosynthesis I (bacteria and plants)
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* molecular weight:
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** 1088.005   
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* Synonym(s):
 
* Synonym(s):
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** riboflavin, FMN and FAD biosynthesis
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** vitamin B2 biosynthesis
  
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== Reaction(s) known to consume the compound ==
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== Reaction(s) found ==
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== Reaction(s) known to produce the compound ==
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'''7''' reactions found over '''9''' reactions in the full pathway
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* [[RXN-14493]]
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* [[DIOHBUTANONEPSYN-RXN]]
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== Reaction(s) of unknown directionality ==
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** 2 associated gene(s):
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*** [[Tiso_gene_14275]]
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*** [[Tiso_gene_19932]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[FADSYN-RXN]]
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** 4 associated gene(s):
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*** [[Tiso_gene_5393]]
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*** [[Tiso_gene_5392]]
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*** [[Tiso_gene_7479]]
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*** [[Tiso_gene_1086]]
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** 4 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-creinhardtii]]
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*** [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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* [[GTP-CYCLOHYDRO-II-RXN]]
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** 3 associated gene(s):
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*** [[Tiso_gene_14275]]
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*** [[Tiso_gene_19932]]
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*** [[Tiso_gene_8035]]
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** 4 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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* [[RIBOFLAVIN-SYN-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_13686]]
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** 4 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[orthology-creinhardtii]]
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*** [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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* [[RIBOFLAVINKIN-RXN]]
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** 3 associated gene(s):
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*** [[Tiso_gene_7479]]
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*** [[Tiso_gene_16837]]
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*** [[Tiso_gene_1086]]
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** 4 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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* [[RIBOFLAVINSYNDEAM-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_1389]]
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** 4 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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* [[RIBOFLAVINSYNREDUC-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_8035]]
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*** [[Tiso_gene_1389]]
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** 4 reconstruction source(s) associated:
 +
*** [[orthology-athaliana]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-synechocystis]]
 +
*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=LUMAZINESYN-RXN LUMAZINESYN-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RIBOPHOSPHAT-RXN RIBOPHOSPHAT-RXN]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* ECOCYC:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=91819813 91819813]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY]
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{{#set: smiles=CCCCCCC(O)CC=CCCCCCCCC(O)CC(SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])=O}}
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* ARACYC:
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{{#set: inchi key=InChIKey=CHMQNMKVOYFHHX-SGPQCWJRSA-J}}
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** [http://metacyc.org/ARA/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY]
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{{#set: common name=3R-hydroxy-lesqueroloyl-CoA}}
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{{#set: taxonomic range=TAX-33090}}
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{{#set: molecular weight=1088.005    }}
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{{#set: taxonomic range=TAX-2}}
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{{#set: produced by=RXN-14493}}
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{{#set: common name=flavin biosynthesis I (bacteria and plants)}}
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{{#set: common name=riboflavin, FMN and FAD biosynthesis|vitamin B2 biosynthesis}}
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{{#set: reaction found=7}}
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{{#set: total reaction=9}}
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{{#set: completion rate=78.0}}

Latest revision as of 19:12, 21 March 2018

Pathway RIBOSYN2-PWY

  • taxonomic range:
  • common name:
    • flavin biosynthesis I (bacteria and plants)
  • Synonym(s):
    • riboflavin, FMN and FAD biosynthesis
    • vitamin B2 biosynthesis

Reaction(s) found

7 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RIBOSYN2-PWY&oldid=40133"