Difference between revisions of "2.7.7.60-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_395 == * left end position: ** 8706 * transcription direction: ** POSITIVE * right end position: ** 11990 * centisome position: ** 25.52555...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.7.60-RXN 2.7.7.60-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 2-c-methyl-d-erythrit...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_395 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.7.60-RXN 2.7.7.60-RXN] ==
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* left end position:
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* direction:
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** 8706
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** 2-c-methyl-d-erythritol_4-phosphate_cytidylyltransferase
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* right end position:
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* ec number:
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** 11990
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** [http://enzyme.expasy.org/EC/2.7.7.60 EC-2.7.7.60]
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* centisome position:
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** 25.525553   
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* Synonym(s):
 
* Synonym(s):
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** 4-diphosphocytidyl-2-methylerithritol synthase (sugar nucleotide phosphorylase family)
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[RXN0-4261]]
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* With identifiers:
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** experimental_annotation
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** 1 [[CTP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[2-C-METHYL-D-ERYTHRITOL-4-PHOSPHATE]][c] '''=>''' 1 [[4-CYTIDINE-5-DIPHOSPHO-2-C]][c] '''+''' 1 [[PPI]][c]
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***automated-name-match
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* With common name(s):
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== Pathways associated ==
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** 1 CTP[c] '''+''' 1 H+[c] '''+''' 1 2-C-methyl-D-erythritol 4-phosphate[c] '''=>''' 1 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol[c] '''+''' 1 diphosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_17568]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-synechocystis]]
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** Source: [[orthology-esiliculosus]]
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** Source: [[orthology-creinhardtii]]
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== Pathways ==
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* [[NONMEVIPP-PWY]], methylerythritol phosphate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=NONMEVIPP-PWY NONMEVIPP-PWY]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7560]], methylerythritol phosphate pathway II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7560 PWY-7560]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=8706}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13429 13429]
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{{#set: right end position=11990}}
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* LIGAND-RXN:
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{{#set: centisome position=25.525553    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R05633 R05633]
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{{#set: reaction associated=RXN0-4261}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=2-c-methyl-d-erythritol_4-phosphate_cytidylyltransferase}}
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{{#set: ec number=EC-2.7.7.60}}
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{{#set: common name=4-diphosphocytidyl-2-methylerithritol synthase (sugar nucleotide phosphorylase family)}}
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{{#set: gene associated=Tiso_gene_17568}}
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{{#set: in pathway=NONMEVIPP-PWY|PWY-7560}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:12, 21 March 2018

Reaction 2.7.7.60-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 2-c-methyl-d-erythritol_4-phosphate_cytidylyltransferase
  • ec number:
  • Synonym(s):
    • 4-diphosphocytidyl-2-methylerithritol synthase (sugar nucleotide phosphorylase family)

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • NONMEVIPP-PWY, methylerythritol phosphate pathway I: NONMEVIPP-PWY
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-7560, methylerythritol phosphate pathway II: PWY-7560
    • 9 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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