Difference between revisions of "CPD-12366"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=THREDEHYD-RXN THREDEHYD-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** threonine_mitochond...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-12366 CPD-12366] == * smiles: ** C(OP(=O)([O-])OP(=O)(OP([O-])([O-])=O)[O-])C1(OC(C(O)C(O)1...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=THREDEHYD-RXN THREDEHYD-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-12366 CPD-12366] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C(OP(=O)([O-])OP(=O)(OP([O-])([O-])=O)[O-])C1(OC(C(O)C(O)1)N3(C(=O)NC2(C(=O)NC(N)=NC=23)))
 
* common name:
 
* common name:
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** threonine_mitochondrial
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** 8-oxo-GTP
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** ORF
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* inchi key:
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** serine_racemase
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** InChIKey=JCHLKIQZUXYLPW-UMMCILCDSA-J
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* ec number:
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* molecular weight:
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** [http://enzyme.expasy.org/EC/4.3.1.19 EC-4.3.1.19]
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** 535.151   
 
* Synonym(s):
 
* Synonym(s):
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** 8-oxo-guanosine-triphosphate
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[THR]][c] '''=>''' 1 [[2-OXOBUTANOATE]][c] '''+''' 1 [[AMMONIUM]][c]
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* [[RXN-11409]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 L-threonine[c] '''=>''' 1 2-oxobutanoate[c] '''+''' 1 ammonium[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_17207]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_8525]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_12535]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways  ==
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* [[PWY66-428]], L-threonine degradation V: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-428 PWY66-428]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[creinhardtii]]
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*** [[synechocystis]]
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*** [[esiliculosus]]
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*** [[athaliana]]
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22108 22108]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=46173271 46173271]
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* LIGAND-RXN:
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{{#set: smiles=C(OP(=O)([O-])OP(=O)(OP([O-])([O-])=O)[O-])C1(OC(C(O)C(O)1)N3(C(=O)NC2(C(=O)NC(N)=NC=23)))}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00996 R00996]
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{{#set: common name=8-oxo-GTP}}
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* UNIPROT:
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{{#set: inchi key=InChIKey=JCHLKIQZUXYLPW-UMMCILCDSA-J}}
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** [http://www.uniprot.org/uniprot/P25306 P25306]
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{{#set: molecular weight=535.151    }}
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** [http://www.uniprot.org/uniprot/Q04513 Q04513]
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{{#set: common name=8-oxo-guanosine-triphosphate}}
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** [http://www.uniprot.org/uniprot/P37946 P37946]
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{{#set: produced by=RXN-11409}}
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** [http://www.uniprot.org/uniprot/Q9JZW1 Q9JZW1]
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** [http://www.uniprot.org/uniprot/Q02145 Q02145]
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** [http://www.uniprot.org/uniprot/P66897 P66897]
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** [http://www.uniprot.org/uniprot/Q9WYJ1 Q9WYJ1]
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** [http://www.uniprot.org/uniprot/Q9PP95 Q9PP95]
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** [http://www.uniprot.org/uniprot/P25379 P25379]
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** [http://www.uniprot.org/uniprot/P00927 P00927]
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** [http://www.uniprot.org/uniprot/P20506 P20506]
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** [http://www.uniprot.org/uniprot/P0AGF6 P0AGF6]
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** [http://www.uniprot.org/uniprot/P04968 P04968]
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** [http://www.uniprot.org/uniprot/P20132 P20132]
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** [http://www.uniprot.org/uniprot/P09367 P09367]
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** [http://www.uniprot.org/uniprot/Q9RWU8 Q9RWU8]
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** [http://www.uniprot.org/uniprot/Q9JUX5 Q9JUX5]
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** [http://www.uniprot.org/uniprot/Q9ZD93 Q9ZD93]
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** [http://www.uniprot.org/uniprot/P31212 P31212]
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** [http://www.uniprot.org/uniprot/P36007 P36007]
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** [http://www.uniprot.org/uniprot/P73375 P73375]
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** [http://www.uniprot.org/uniprot/Q9T0D1 Q9T0D1]
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** [http://www.uniprot.org/uniprot/Q39469 Q39469]
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** [http://www.uniprot.org/uniprot/Q93968 Q93968]
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** [http://www.uniprot.org/uniprot/Q9XAA4 Q9XAA4]
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** [http://www.uniprot.org/uniprot/O94634 O94634]
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** [http://www.uniprot.org/uniprot/O59791 O59791]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=threonine_mitochondrial}}
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{{#set: common name=ORF}}
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{{#set: common name=serine_racemase}}
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{{#set: ec number=EC-4.3.1.19}}
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{{#set: gene associated=Tiso_gene_17207|Tiso_gene_8525|Tiso_gene_12535}}
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{{#set: in pathway=PWY66-428}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii|synechocystis|esiliculosus|athaliana}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 19:13, 21 March 2018

Metabolite CPD-12366

  • smiles:
    • C(OP(=O)([O-])OP(=O)(OP([O-])([O-])=O)[O-])C1(OC(C(O)C(O)1)N3(C(=O)NC2(C(=O)NC(N)=NC=23)))
  • common name:
    • 8-oxo-GTP
  • inchi key:
    • InChIKey=JCHLKIQZUXYLPW-UMMCILCDSA-J
  • molecular weight:
    • 535.151
  • Synonym(s):
    • 8-oxo-guanosine-triphosphate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"C(OP(=O)([O-])OP(=O)(OP([O-])([O-])=O)[O-])C1(OC(C(O)C(O)1)N3(C(=O)NC2(C(=O)NC(N)=NC=23)))" cannot be used as a page name in this wiki.



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