Difference between revisions of "PWY-6397"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3701 RXN-3701] == * direction: ** REVERSIBLE * common name: ** rab_proteins_geranylgeranyltrans...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6397 PWY-6397] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1762 TAX-17...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3701 RXN-3701] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6397 PWY-6397] ==
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* direction:
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* taxonomic range:
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1762 TAX-1762]
 
* common name:
 
* common name:
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** rab_proteins_geranylgeranyltransferase_component_a_2
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** mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
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** protein_geranylgeranyltransferase_type_ii
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* ec number:
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** [http://enzyme.expasy.org/EC/2.5.1.60 EC-2.5.1.60]
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** [http://enzyme.expasy.org/EC/2.5.1.59 EC-2.5.1.59]
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* Synonym(s):
 
* Synonym(s):
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** arabinogalactan biosynthesis
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''2''' reactions found over '''17''' reactions in the full pathway
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** 1 [[GERANYLGERANYL-PP]][c] '''+''' 1 [[PROT-CYS]][c] '''<=>''' 1 [[S-GERANYLGERANYL-PROTEIN]][c] '''+''' 1 [[PPI]][c]
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* [[GALPMUT-RXN]]
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* With common name(s):
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** 2 associated gene(s):
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** 1 geranylgeranyl diphosphate[c] '''+''' 1 a [protein]-L-cysteine[c] '''<=>''' 1 a [protein]-S-geranylgeranyl-L-cysteine[c] '''+''' 1 diphosphate[c]
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*** [[Tiso_gene_15395]]
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*** [[Tiso_gene_3775]]
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== Genes associated with this reaction  ==
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** 2 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-in-silico_annotation]]
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* [[Tiso_gene_18628]]
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*** [[annotation-experimental_annotation]]
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** IN-SILICO_ANNOTATION
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* [[UDPGLUCEPIM-RXN]]
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***EC-NUMBER
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** 4 associated gene(s):
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* [[Tiso_gene_18785]]
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*** [[Tiso_gene_9823]]
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_15395]]
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***EC-NUMBER
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*** [[Tiso_gene_3236]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_10797]]
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* [[Tiso_gene_18627]]
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** 5 reconstruction source(s) associated:
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** IN-SILICO_ANNOTATION
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*** [[annotation-in-silico_annotation]]
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***EC-NUMBER
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*** [[orthology-athaliana]]
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== Pathways  ==
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*** [[annotation-experimental_annotation]]
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== Reconstruction information  ==
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*** [[orthology-synechocystis]]
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* [[orthology]]:
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*** [[orthology-esiliculosus]]
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** [[pantograph]]:
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== Reaction(s) not found ==
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*** [[esiliculosus]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11070 RXN-11070]
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* [[annotation]]:
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11072 RXN-11072]
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** [[pathwaytools]]:
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11075 RXN-11075]
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*** [[in-silico_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11077 RXN-11077]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11078 RXN-11078]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11079 RXN-11079]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11080 RXN-11080]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11081 RXN-11081]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11082 RXN-11082]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11091 RXN-11091]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11092 RXN-11092]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11093 RXN-11093]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11094 RXN-11094]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-6380 RXN-6380]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-1633 RXN1G-1633]
 
== External links  ==
 
== External links  ==
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{{#set: direction=REVERSIBLE}}
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{{#set: taxonomic range=TAX-1762}}
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{{#set: common name=rab_proteins_geranylgeranyltransferase_component_a_2}}
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{{#set: common name=mycolyl-arabinogalactan-peptidoglycan complex biosynthesis}}
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{{#set: common name=protein_geranylgeranyltransferase_type_ii}}
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{{#set: common name=arabinogalactan biosynthesis}}
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{{#set: ec number=EC-2.5.1.60}}
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{{#set: reaction found=2}}
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{{#set: ec number=EC-2.5.1.59}}
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{{#set: total reaction=17}}
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{{#set: gene associated=Tiso_gene_18628|Tiso_gene_18785|Tiso_gene_18627}}
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{{#set: completion rate=12.0}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 19:14, 21 March 2018

Pathway PWY-6397

  • taxonomic range:
  • common name:
    • mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
  • Synonym(s):
    • arabinogalactan biosynthesis

Reaction(s) found

2 reactions found over 17 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6397&oldid=40399"