Difference between revisions of "FGAMSYN-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=3-SULFINYL-PYRUVATE 3-SULFINYL-PYRUVATE] == * smiles: ** C(S([O-])=O)C(=O)C(=O)[O-] * inchi key...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FGAMSYN-RXN FGAMSYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** phosphoribosylformylgly...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=3-SULFINYL-PYRUVATE 3-SULFINYL-PYRUVATE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FGAMSYN-RXN FGAMSYN-RXN] ==
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* smiles:
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* direction:
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** C(S([O-])=O)C(=O)C(=O)[O-]
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=JXYLQEMXCAAMOL-UHFFFAOYSA-L
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* common name:
 
* common name:
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** 3-sulfinopyruvate
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** phosphoribosylformylglycinamidine_synthase-like
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* molecular weight:
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* ec number:
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** 150.106   
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** [http://enzyme.expasy.org/EC/6.3.5.3 EC-6.3.5.3]
 
* Synonym(s):
 
* Synonym(s):
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** 3-sulphinyl-pyruvate
 
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** β-sulfinylpyruvate
 
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** 3-sulfinyl-pyruvate
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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== Reaction(s) of unknown directionality ==
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** 1 [[5-P-RIBOSYL-N-FORMYLGLYCINEAMIDE]][c] '''+''' 1 [[GLN]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[5-PHOSPHORIBOSYL-N-FORMYLGLYCINEAMIDINE]][c] '''+''' 1 [[PROTON]][c]
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* [[3-SULFINOALANINE-AMINOTRANSFERASE-RXN]]
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* With common name(s):
 +
** 1 N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide[c] '''+''' 1 L-glutamine[c] '''+''' 1 H2O[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 phosphate[c] '''+''' 1 L-glutamate[c] '''+''' 1 2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine[c] '''+''' 1 H+[c]
 +
 
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_5865]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-athaliana]]
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== Pathways  ==
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* [[PWY-6121]], 5-aminoimidazole ribonucleotide biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6121 PWY-6121]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6122]], 5-aminoimidazole ribonucleotide biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6122 PWY-6122]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6277]], superpathway of 5-aminoimidazole ribonucleotide biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6277 PWY-6277]
 +
** '''6''' reactions found over '''9''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* LIGAND-CPD:
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* RHEA:
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** [http://www.genome.jp/dbget-bin/www_bget?C05527 C05527]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17129 17129]
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* CHEBI:
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* LIGAND-RXN:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=1665 1665]
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** [http://www.genome.jp/dbget-bin/www_bget?R04463 R04463]
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* METABOLIGHTS : MTBLC1665
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* UNIPROT:
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* PUBCHEM:
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** [http://www.uniprot.org/uniprot/O67691 O67691]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25244536 25244536]
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** [http://www.uniprot.org/uniprot/Q9UXW5 Q9UXW5]
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* HMDB : HMDB02332
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** [http://www.uniprot.org/uniprot/Q9PNY0 Q9PNY0]
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{{#set: smiles=C(S([O-])=O)C(=O)C(=O)[O-]}}
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** [http://www.uniprot.org/uniprot/O28339 O28339]
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{{#set: inchi key=InChIKey=JXYLQEMXCAAMOL-UHFFFAOYSA-L}}
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** [http://www.uniprot.org/uniprot/Q9PHZ7 Q9PHZ7]
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{{#set: common name=3-sulfinopyruvate}}
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** [http://www.uniprot.org/uniprot/O26270 O26270]
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{{#set: molecular weight=150.106    }}
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** [http://www.uniprot.org/uniprot/Q59042 Q59042]
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{{#set: common name=3-sulphinyl-pyruvate|β-sulfinylpyruvate|3-sulfinyl-pyruvate}}
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** [http://www.uniprot.org/uniprot/Q58660 Q58660]
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{{#set: consumed or produced by=3-SULFINOALANINE-AMINOTRANSFERASE-RXN}}
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** [http://www.uniprot.org/uniprot/O27427 O27427]
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** [http://www.uniprot.org/uniprot/Q9JWC5 Q9JWC5]
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** [http://www.uniprot.org/uniprot/P35852 P35852]
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** [http://www.uniprot.org/uniprot/P38972 P38972]
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** [http://www.uniprot.org/uniprot/Q55843 Q55843]
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** [http://www.uniprot.org/uniprot/Q55037 Q55037]
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** [http://www.uniprot.org/uniprot/P12041 P12041]
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** [http://www.uniprot.org/uniprot/P12042 P12042]
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** [http://www.uniprot.org/uniprot/P15254 P15254]
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** [http://www.uniprot.org/uniprot/O14228 O14228]
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** [http://www.uniprot.org/uniprot/P35421 P35421]
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** [http://www.uniprot.org/uniprot/Q9ZB07 Q9ZB07]
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** [http://www.uniprot.org/uniprot/Q9ZB06 Q9ZB06]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=phosphoribosylformylglycinamidine_synthase-like}}
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{{#set: ec number=EC-6.3.5.3}}
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{{#set: gene associated=Tiso_gene_5865}}
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{{#set: in pathway=PWY-6121|PWY-6122|PWY-6277}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|orthology-athaliana|annotation-in-silico_annotation|manual-primary_network}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:15, 21 March 2018

Reaction FGAMSYN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • phosphoribosylformylglycinamidine_synthase-like
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6121, 5-aminoimidazole ribonucleotide biosynthesis I: PWY-6121
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6122, 5-aminoimidazole ribonucleotide biosynthesis II: PWY-6122
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-6277, superpathway of 5-aminoimidazole ribonucleotide biosynthesis: PWY-6277
    • 6 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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