Difference between revisions of "RXN-17919"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_5424 == * left end position: ** 7226 * transcription direction: ** NEGATIVE * right end position: ** 9247 * centisome position: ** 53.57752...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17919 RXN-17919] == * direction: ** LEFT-TO-RIGHT * common name: ** dna_ligase_mrna_capping_enz...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Category:Gene]]
+
[[Category:Reaction]]
== Gene Tiso_gene_5424 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17919 RXN-17919] ==
* left end position:
+
* direction:
** 7226
+
** LEFT-TO-RIGHT
* transcription direction:
+
* common name:
** NEGATIVE
+
** dna_ligase_mrna_capping_enzyme
* right end position:
+
** dna_ligase
** 9247
+
** ORF
* centisome position:
+
** 53.57752   
+
 
* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
+
== Reaction Formula ==
* [[1.2.1.31-RXN]]
+
* With identifiers:
** in-silico_annotation
+
** 1 [[3-Hydroxy-Terminated-DNAs]][c] '''+''' 1 [[A-5-prime-PP-5-prime-DNA]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[DNA-N]][c]
***ec-number
+
* With common name(s):
* [[ALCOHOL-DEHYDROG-GENERIC-RXN]]
+
** 1 a [DNA]-3'-hydroxyl[c] '''+''' 1 a 5'-(5'-diphosphoadenosine)-[DNA][c] '''=>''' 1 H+[c] '''+''' 1 AMP[c] '''+''' 1 DNAn[c]
** in-silico_annotation
+
 
***ec-number
+
== Genes associated with this reaction  ==
* [[ALCOHOL-DEHYDROG-RXN]]
+
Genes have been associated with this reaction based on different elements listed below.
** in-silico_annotation
+
* Gene: [[Tiso_gene_11251]]
***ec-number
+
** Source: [[annotation-in-silico_annotation]]
* [[ALLYSINE-DEHYDROG-RXN]]
+
*** Assignment: EC-NUMBER
** in-silico_annotation
+
* Gene: [[Tiso_gene_14249]]
***ec-number
+
** Source: [[annotation-in-silico_annotation]]
* [[L-IDITOL-2-DEHYDROGENASE-RXN]]
+
*** Assignment: EC-NUMBER
** in-silico_annotation
+
* Gene: [[Tiso_gene_14250]]
***ec-number
+
** Source: [[annotation-in-silico_annotation]]
* [[PROTEIN-TYROSINE-SULFOTRANSFERASE-RXN]]
+
*** Assignment: EC-NUMBER
** in-silico_annotation
+
* Gene: [[Tiso_gene_3498]]
***ec-number
+
** Source: [[annotation-in-silico_annotation]]
* [[RXN-10781]]
+
*** Assignment: EC-NUMBER
** in-silico_annotation
+
* Gene: [[Tiso_gene_12142]]
***ec-number
+
** Source: [[annotation-in-silico_annotation]]
* [[RXN-10855]]
+
*** Assignment: EC-NUMBER
** in-silico_annotation
+
* Gene: [[Tiso_gene_6743]]
***ec-number
+
** Source: [[annotation-in-silico_annotation]]
* [[RXN-10911]]
+
*** Assignment: EC-NUMBER
** in-silico_annotation
+
== Pathways  ==
***ec-number
+
== Reconstruction information  ==
* [[RXN-10915]]
+
* Category: [[annotation]]
** in-silico_annotation
+
** Source: [[annotation-in-silico_annotation]]
***ec-number
+
*** Tool: [[pathwaytools]]
* [[RXN-12448]]
+
** in-silico_annotation
+
***ec-number
+
* [[RXN-12560]]
+
** in-silico_annotation
+
***ec-number
+
* [[RXN-13198]]
+
** in-silico_annotation
+
***ec-number
+
* [[RXN-13279]]
+
** in-silico_annotation
+
***ec-number
+
* [[RXN-5424]]
+
** in-silico_annotation
+
***ec-number
+
* [[RXN-5901]]
+
** in-silico_annotation
+
***ec-number
+
* [[RXN-7644]]
+
** in-silico_annotation
+
***ec-number
+
* [[RXN-7657]]
+
** in-silico_annotation
+
***ec-number
+
* [[RXN-7693]]
+
** in-silico_annotation
+
***ec-number
+
* [[RXN-7694]]
+
** in-silico_annotation
+
***ec-number
+
* [[RXN-7700]]
+
** in-silico_annotation
+
***ec-number
+
* [[RXN-7706]]
+
** in-silico_annotation
+
***ec-number
+
* [[RXN3O-4113]]
+
** in-silico_annotation
+
***ec-number
+
* [[RXN66-478]]
+
** in-silico_annotation
+
***ec-number
+
== Pathways associated ==
+
* [[PWY66-21]]
+
* [[PWY-6587]]
+
* [[PWY-7111]]
+
* [[FERMENTATION-PWY]]
+
* [[PWY-5676]]
+
* [[PWY-5082]]
+
* [[PWY-7118]]
+
* [[PWY-7013]]
+
* [[PWY-3162]]
+
* [[PWY-5751]]
+
* [[PWY-6342]]
+
* [[PWY1-3]]
+
* [[P161-PWY]]
+
* [[ETOH-ACETYLCOA-ANA-PWY]]
+
* [[PWY-6871]]
+
* [[PWY-7396]]
+
* [[PWY-5057]]
+
* [[PWY-5741]]
+
* [[PWY-5076]]
+
* [[PWY-6333]]
+
* [[PWY-5486]]
+
* [[PWY-5079]]
+
* [[PWY-5078]]
+
* [[PWY-6313]]
+
* [[PWY66-425]]
+
* [[PWY-5480]]
+
* [[PWY3O-4108]]
+
* [[PWY-7216]]
+
* [[PWY-6802]]
+
* [[LYSINE-DEG1-PWY]]
+
* [[P122-PWY]]
+
* [[PWY66-389]]
+
* [[PWY4LZ-257]]
+
* [[PWY-4101]]
+
 
== External links  ==
 
== External links  ==
{{#set: left end position=7226}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: transcription direction=NEGATIVE}}
+
{{#set: common name=dna_ligase_mrna_capping_enzyme}}
{{#set: right end position=9247}}
+
{{#set: common name=dna_ligase}}
{{#set: centisome position=53.57752    }}
+
{{#set: common name=ORF}}
{{#set: reaction associated=1.2.1.31-RXN|ALCOHOL-DEHYDROG-GENERIC-RXN|ALCOHOL-DEHYDROG-RXN|ALLYSINE-DEHYDROG-RXN|L-IDITOL-2-DEHYDROGENASE-RXN|PROTEIN-TYROSINE-SULFOTRANSFERASE-RXN|RXN-10781|RXN-10855|RXN-10911|RXN-10915|RXN-12448|RXN-12560|RXN-13198|RXN-13279|RXN-5424|RXN-5901|RXN-7644|RXN-7657|RXN-7693|RXN-7694|RXN-7700|RXN-7706|RXN3O-4113|RXN66-478}}
+
{{#set: gene associated=Tiso_gene_11251|Tiso_gene_14249|Tiso_gene_14250|Tiso_gene_3498|Tiso_gene_12142|Tiso_gene_6743}}
{{#set: pathway associated=PWY66-21|PWY-6587|PWY-7111|FERMENTATION-PWY|PWY-5676|PWY-5082|PWY-7118|PWY-7013|PWY-3162|PWY-5751|PWY-6342|PWY1-3|P161-PWY|ETOH-ACETYLCOA-ANA-PWY|PWY-6871|PWY-7396|PWY-5057|PWY-5741|PWY-5076|PWY-6333|PWY-5486|PWY-5079|PWY-5078|PWY-6313|PWY66-425|PWY-5480|PWY3O-4108|PWY-7216|PWY-6802|LYSINE-DEG1-PWY|P122-PWY|PWY66-389|PWY4LZ-257|PWY-4101}}
+
{{#set: in pathway=}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:15, 21 March 2018

Reaction RXN-17919

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • dna_ligase_mrna_capping_enzyme
    • dna_ligase
    • ORF
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links