Difference between revisions of "PYRUVATE-CARBOXYLASE-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5506 PWY-5506] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRUVATE-CARBOXYLASE-RXN PYRUVATE-CARBOXYLASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5506 PWY-5506] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRUVATE-CARBOXYLASE-RXN PYRUVATE-CARBOXYLASE-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** methanol oxidation to formaldehyde IV
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** ORF
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** Pyruvate carboxylase
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* ec number:
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** [http://enzyme.expasy.org/EC/6.4.1.1 EC-6.4.1.1]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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* '''1''' reaction(s) found
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* With identifiers:
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** [[CATAL-RXN]]
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** 1 [[PYRUVATE]][c] '''+''' 1 [[HCO3]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[OXALACETIC_ACID]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c]
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== Reaction(s) not found ==
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* With common name(s):
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* '''1''' reaction(s) not found
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** 1 pyruvate[c] '''+''' 1 hydrogencarbonate[c] '''+''' 1 ATP[c] '''=>''' 1 phosphate[c] '''+''' 1 oxaloacetate[c] '''+''' 1 ADP[c] '''+''' 1 H+[c]
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** [http://metacyc.org/META/NEW-IMAGE?object=METHANOL-OXIDASE-RXN METHANOL-OXIDASE-RXN]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_15144]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_15145]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_2812]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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* [[PWY-6142]], gluconeogenesis II (Methanobacterium thermoautotrophicum): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6142 PWY-6142]
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** '''8''' reactions found over '''14''' reactions in the full pathway
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* [[PWY-6146]], Methanobacterium thermoautotrophicum biosynthetic metabolism: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6146 PWY-6146]
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** '''7''' reactions found over '''16''' reactions in the full pathway
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* [[P42-PWY]], incomplete reductive TCA cycle: [http://metacyc.org/META/NEW-IMAGE?object=P42-PWY P42-PWY]
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** '''4''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-5750]], itaconate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5750 PWY-5750]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY66-399]], gluconeogenesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-399 PWY66-399]
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** '''10''' reactions found over '''12''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-4751}}
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* RHEA:
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{{#set: common name=methanol oxidation to formaldehyde IV}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20844 20844]
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{{#set: reaction found=1}}
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* LIGAND-RXN:
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{{#set: reaction not found=1}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00344 R00344]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/Q05920 Q05920]
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** [http://www.uniprot.org/uniprot/Q9PNQ4 Q9PNQ4]
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** [http://www.uniprot.org/uniprot/P95127 P95127]
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** [http://www.uniprot.org/uniprot/Q9PP00 Q9PP00]
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** [http://www.uniprot.org/uniprot/Q9CHQ7 Q9CHQ7]
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** [http://www.uniprot.org/uniprot/Q9KWU4 Q9KWU4]
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** [http://www.uniprot.org/uniprot/P11498 P11498]
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** [http://www.uniprot.org/uniprot/P52873 P52873]
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** [http://www.uniprot.org/uniprot/P11154 P11154]
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** [http://www.uniprot.org/uniprot/P32327 P32327]
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** [http://www.uniprot.org/uniprot/O17732 O17732]
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** [http://www.uniprot.org/uniprot/Q9UUE1 Q9UUE1]
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** [http://www.uniprot.org/uniprot/Q16921 Q16921]
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** [http://www.uniprot.org/uniprot/Q9XBJ1 Q9XBJ1]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=ORF}}
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{{#set: common name=Pyruvate carboxylase}}
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{{#set: ec number=EC-6.4.1.1}}
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{{#set: gene associated=Tiso_gene_15144|Tiso_gene_15145|Tiso_gene_2812}}
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{{#set: in pathway=PWY-6142|PWY-6146|P42-PWY|PWY-5750|PWY66-399}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|manual-primary_network|annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:15, 21 March 2018

Reaction PYRUVATE-CARBOXYLASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
    • Pyruvate carboxylase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 pyruvate[c] + 1 hydrogencarbonate[c] + 1 ATP[c] => 1 phosphate[c] + 1 oxaloacetate[c] + 1 ADP[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6142, gluconeogenesis II (Methanobacterium thermoautotrophicum): PWY-6142
    • 8 reactions found over 14 reactions in the full pathway
  • PWY-6146, Methanobacterium thermoautotrophicum biosynthetic metabolism: PWY-6146
    • 7 reactions found over 16 reactions in the full pathway
  • P42-PWY, incomplete reductive TCA cycle: P42-PWY
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-5750, itaconate biosynthesis: PWY-5750
    • 3 reactions found over 4 reactions in the full pathway
  • PWY66-399, gluconeogenesis III: PWY66-399
    • 10 reactions found over 12 reactions in the full pathway

Reconstruction information

External links





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