Difference between revisions of "PWY-5723"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P164-PWY P164-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-12...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5723 PWY-5723] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-58024 TAX-5...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Pathway]]
 
[[Category:Pathway]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P164-PWY P164-PWY] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5723 PWY-5723] ==
 
* taxonomic range:
 
* taxonomic range:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-1239]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-58024 TAX-58024]
 
* common name:
 
* common name:
−
** purine nucleobases degradation I (anaerobic)
+
** Rubisco shunt
 
* Synonym(s):
 
* Synonym(s):
−
** purine fermentation
 
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
−
* '''4''' reaction(s) found
+
'''10''' reactions found over '''10''' reactions in the full pathway
−
** [[RXN-7682]]
+
* [[1TRANSKETO-RXN]]
−
** [[RXN0-901]]
+
** 2 associated gene(s):
−
** [[METHENYLTHFCYCLOHYDRO-RXN]]
+
*** [[Tiso_gene_11559]]
−
** [[GUANINE-DEAMINASE-RXN]]
+
*** [[Tiso_gene_5008]]
 +
** 5 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
* [[2PGADEHYDRAT-RXN]]
 +
** 4 associated gene(s):
 +
*** [[Tiso_gene_8720]]
 +
*** [[Tiso_gene_14718]]
 +
*** [[Tiso_gene_5619]]
 +
*** [[Tiso_gene_13317]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[2TRANSKETO-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_11559]]
 +
*** [[Tiso_gene_5008]]
 +
** 5 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-creinhardtii]]
 +
*** [[manual-primary_network]]
 +
*** [[annotation-in-silico_annotation]]
 +
* [[3PGAREARR-RXN]]
 +
** 16 associated gene(s):
 +
*** [[Tiso_gene_15048]]
 +
*** [[Tiso_gene_7201]]
 +
*** [[Tiso_gene_9922]]
 +
*** [[Tiso_gene_2841]]
 +
*** [[Tiso_gene_14530]]
 +
*** [[Tiso_gene_16754]]
 +
*** [[Tiso_gene_2365]]
 +
*** [[Tiso_gene_16271]]
 +
*** [[Tiso_gene_5468]]
 +
*** [[Tiso_gene_20311]]
 +
*** [[Tiso_gene_14664]]
 +
*** [[Tiso_gene_15391]]
 +
*** [[Tiso_gene_14212]]
 +
*** [[Tiso_gene_10516]]
 +
*** [[Tiso_gene_9923]]
 +
*** [[Tiso_gene_2667]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[PEPDEPHOS-RXN]]
 +
** 4 associated gene(s):
 +
*** [[Tiso_gene_18206]]
 +
*** [[Tiso_gene_14504]]
 +
*** [[Tiso_gene_974]]
 +
*** [[Tiso_gene_14505]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[PHOSPHORIBULOKINASE-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_17637]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[RIB5PISOM-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_18217]]
 +
** 5 reconstruction source(s) associated:
 +
*** [[orthology-athaliana]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-synechocystis]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[manual-primary_network]]
 +
* [[RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_12199]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[manual-primary_network]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RIBULP3EPIM-RXN]]
 +
** 3 associated gene(s):
 +
*** [[Tiso_gene_19140]]
 +
*** [[Tiso_gene_4754]]
 +
*** [[Tiso_gene_10879]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[TRANSALDOL-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_17601]]
 +
*** [[Tiso_gene_1831]]
 +
** 6 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
−
* '''13''' reaction(s) not found
 
−
** [http://metacyc.org/META/NEW-IMAGE?object=FORMYLTHFDEFORMYL-RXN FORMYLTHFDEFORMYL-RXN]
 
−
** [http://metacyc.org/META/NEW-IMAGE?object=R127-RXN R127-RXN]
 
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-8755 RXN-8755]
 
−
** [http://metacyc.org/META/NEW-IMAGE?object=ACETATEKIN-RXN ACETATEKIN-RXN]
 
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-8752 RXN-8752]
 
−
** [http://metacyc.org/META/NEW-IMAGE?object=R128-RXN R128-RXN]
 
−
** [http://metacyc.org/META/NEW-IMAGE?object=R13-RXN R13-RXN]
 
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-7566 RXN-7566]
 
−
** [http://metacyc.org/META/NEW-IMAGE?object=R62-RXN R62-RXN]
 
−
** [http://metacyc.org/META/NEW-IMAGE?object=GLYCINE-FORMIMINOTRANSFERASE-RXN GLYCINE-FORMIMINOTRANSFERASE-RXN]
 
−
** [http://metacyc.org/META/NEW-IMAGE?object=4.3.1.4-RXN 4.3.1.4-RXN]
 
−
** [http://metacyc.org/META/NEW-IMAGE?object=1.2.1.2-RXN 1.2.1.2-RXN]
 
−
** [http://metacyc.org/META/NEW-IMAGE?object=R63-RXN R63-RXN]
 
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-1239}}
+
{{#set: taxonomic range=TAX-58024}}
−
{{#set: common name=purine nucleobases degradation I (anaerobic)}}
+
{{#set: common name=Rubisco shunt}}
−
{{#set: common name=purine fermentation}}
+
{{#set: reaction found=10}}
−
{{#set: reaction found=4}}
+
{{#set: total reaction=10}}
−
{{#set: reaction not found=13}}
+
{{#set: completion rate=100.0}}

Latest revision as of 19:16, 21 March 2018

Pathway PWY-5723

  • taxonomic range:
  • common name:
    • Rubisco shunt
  • Synonym(s):

Reaction(s) found

10 reactions found over 10 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-5723&oldid=40506"