Difference between revisions of "RXN-8991"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_6766 == * left end position: ** 8741 * transcription direction: ** NEGATIVE * right end position: ** 10625 * centisome position: ** 73.7201...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8991 RXN-8991] == * direction: ** REVERSIBLE * common name: ** 3-isopropylmalate dehydratase **...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8991 RXN-8991] == |
| − | * | + | * direction: |
| − | + | ** REVERSIBLE | |
| − | + | * common name: | |
| − | ** | + | ** 3-isopropylmalate dehydratase |
| − | * | + | ** ORF |
| − | ** | + | |
| − | * | + | |
| − | * | + | |
* Synonym(s): | * Synonym(s): | ||
| + | ** (2R,3S)-3-isopropylmalate hydro-lyase | ||
| + | ** β-isopropylmalate dehydratase | ||
| + | ** α-isopropylmalate isomerase | ||
| + | ** 3-isopropylmalate hydro-lyase | ||
| − | == | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | ** in-silico_annotation | + | ** 1 [[2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE]][c] '''<=>''' 1 [[WATER]][c] '''+''' 1 [[CPD-9451]][c] |
| − | *** | + | * With common name(s): |
| − | * [[ | + | ** 1 (2R,3S)-3-isopropylmalate[c] '''<=>''' 1 H2O[c] '''+''' 1 2-isopropylmaleate[c] |
| − | ** [[ | + | |
| − | == Pathways | + | == Genes associated with this reaction == |
| − | * [[ | + | Genes have been associated with this reaction based on different elements listed below. |
| − | + | * Gene: [[Tiso_gene_12778]] | |
| − | * [[ | + | ** Source: [[annotation-in-silico_annotation]] |
| − | * [[ | + | *** Assignment: EC-NUMBER |
| − | * [[ | + | ** Source: [[annotation-experimental_annotation]] |
| − | * [[ | + | *** Assignment: EC-NUMBER |
| − | * [[ | + | ** Source: [[orthology-athaliana]] |
| − | * [[ | + | ** Source: [[orthology-esiliculosus]] |
| − | * [[ | + | == Pathways == |
| − | * [[ | + | * [[LEUSYN-PWY]], L-leucine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=LEUSYN-PWY LEUSYN-PWY] |
| − | * [[ | + | ** '''6''' reactions found over '''6''' reactions in the full pathway |
| − | * [[ | + | * [[PWY-6871]], 3-methylbutanol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6871 PWY-6871] |
| − | * [[ | + | ** '''6''' reactions found over '''7''' reactions in the full pathway |
| + | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-athaliana]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
| + | ** Source: [[annotation-experimental_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | * RHEA: |
| − | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10676 10676] |
| − | {{#set: | + | * LIGAND-RXN: |
| − | {{#set: | + | ** [http://www.genome.jp/dbget-bin/www_bget?R04001 R04001] |
| − | {{#set: | + | {{#set: direction=REVERSIBLE}} |
| − | {{#set: pathway | + | {{#set: common name=3-isopropylmalate dehydratase}} |
| + | {{#set: common name=ORF}} | ||
| + | {{#set: common name=(2R,3S)-3-isopropylmalate hydro-lyase|β-isopropylmalate dehydratase|α-isopropylmalate isomerase|3-isopropylmalate hydro-lyase}} | ||
| + | {{#set: gene associated=Tiso_gene_12778}} | ||
| + | {{#set: in pathway=LEUSYN-PWY|PWY-6871}} | ||
| + | {{#set: reconstruction category=orthology|annotation}} | ||
| + | {{#set: reconstruction source=annotation-in-silico_annotation|orthology-athaliana|annotation-experimental_annotation|orthology-esiliculosus}} | ||
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 19:16, 21 March 2018
Contents
Reaction RXN-8991
- direction:
- REVERSIBLE
- common name:
- 3-isopropylmalate dehydratase
- ORF
- Synonym(s):
- (2R,3S)-3-isopropylmalate hydro-lyase
- β-isopropylmalate dehydratase
- α-isopropylmalate isomerase
- 3-isopropylmalate hydro-lyase
Reaction Formula
- With identifiers:
- 1 2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE[c] <=> 1 WATER[c] + 1 CPD-9451[c]
- With common name(s):
- 1 (2R,3S)-3-isopropylmalate[c] <=> 1 H2O[c] + 1 2-isopropylmaleate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_12778
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-experimental_annotation
- Assignment: EC-NUMBER
- Source: orthology-athaliana
- Source: orthology-esiliculosus
- Source: annotation-in-silico_annotation
Pathways
- LEUSYN-PWY, L-leucine biosynthesis: LEUSYN-PWY
- 6 reactions found over 6 reactions in the full pathway
- PWY-6871, 3-methylbutanol biosynthesis (engineered): PWY-6871
- 6 reactions found over 7 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-athaliana
- Tool: pantograph
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-athaliana
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
